Gene : Glyma.13G190500 G. max Wm82.a2.v1
Defline:  (1 of 16) PTHR12383 - PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED Genomic Order:  1905
Name:  ? Glyma.13G190500 Secondary Identifier:  ? PAC:30502433
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G190500 0.5kb upstream 0.5kb upstream 3243 true Chr13: 30413752-30416994 Glycine max
Glyma.13G190500 0.5kb upstream 0.5kb upstream 500 false Chr13: 30416495-30416994 Glycine max
Glyma.13G190500 0.5kb downstream 0.5kb downstream 3243 true Chr13: 30413252-30416494 Glycine max
Glyma.13G190500 0.5kb downstream 0.5kb downstream 500 false Chr13: 30413252-30413751 Glycine max
Glyma.13G190500 1.0kb upstream 1.0kb upstream 3743 true Chr13: 30413752-30417494 Glycine max
Glyma.13G190500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 30416495-30417494 Glycine max
Glyma.13G190500 1.0kb downstream 1.0kb downstream 3743 true Chr13: 30412752-30416494 Glycine max
Glyma.13G190500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 30412752-30413751 Glycine max
Glyma.13G190500 2.0kb upstream 2.0kb upstream 4743 true Chr13: 30413752-30418494 Glycine max
Glyma.13G190500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 30416495-30418494 Glycine max
Glyma.13G190500 2.0kb downstream 2.0kb downstream 4743 true Chr13: 30411752-30416494 Glycine max
Glyma.13G190500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 30411752-30413751 Glycine max
Glyma.13G190500 5.0kb upstream 5.0kb upstream 7743 true Chr13: 30413752-30421494 Glycine max
Glyma.13G190500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 30416495-30421494 Glycine max
Glyma.13G190500 5.0kb downstream 5.0kb downstream 7743 true Chr13: 30408752-30416494 Glycine max
Glyma.13G190500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 30408752-30413751 Glycine max
Glyma.13G190500 10.0kb upstream 10.0kb upstream 12743 true Chr13: 30413752-30426494 Glycine max
Glyma.13G190500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 30416495-30426494 Glycine max
Glyma.13G190500 10.0kb downstream 10.0kb downstream 12743 true Chr13: 30403752-30416494 Glycine max
Glyma.13G190500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 30403752-30413751 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121608763 5273 Angiosperm Singleton cluster - no MSA
122240716 5265 Fabidae Singleton cluster - no MSA
123985716 5270 Rosid Singleton cluster - no MSA
123561116 5271 Pentapetalae Singleton cluster - no MSA
122595908 5272 Eudicot Singleton cluster - no MSA
120881027 5274 Embryophyte Singleton cluster - no MSA
122921882 5275 Viridiplantae Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.104888 0.0 0.421636 Low Low
cufflinks 0.188014 0.0 0.73924 Low  
cufflinks 0.426441 0.0 1.61791   High
cufflinks 0.158083 0.0 0.625288 Low  
cufflinks 0.19121 0.0 0.752196 Low  
cufflinks 0.145072 0.0 0.57582 Low  
cufflinks 0.43817 0.0 1.66516   High
cufflinks 0.155811 0.0 0.616633 Low  
cufflinks 0.121456 0.0 0.485005 Low  
cufflinks 0.016     Low Low
cufflinks 0.026     Low Low
cufflinks 0.177       High
cufflinks 0.063     Low  
cufflinks 0.095        
cufflinks 0.098        
cufflinks 0.128        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.257       High
cufflinks 0.036     Low  
cufflinks 0.117        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.094        
cufflinks 0.132        
cufflinks 0.056     Low  
cufflinks 0.088     Low  
cufflinks 0.021     Low Low

0 Strain