Gene : Glyma.13G190900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR12383//PTHR12383:SF23 - PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED Genomic Order:  1909
Name:  ? Glyma.13G190900 Secondary Identifier:  ? PAC:30502418
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G190900 0.5kb upstream 0.5kb upstream 3686 true Chr13: 30438618-30442303 Glycine max
Glyma.13G190900 0.5kb upstream 0.5kb upstream 500 false Chr13: 30441804-30442303 Glycine max
Glyma.13G190900 0.5kb downstream 0.5kb downstream 3686 true Chr13: 30438118-30441803 Glycine max
Glyma.13G190900 0.5kb downstream 0.5kb downstream 500 false Chr13: 30438118-30438617 Glycine max
Glyma.13G190900 1.0kb upstream 1.0kb upstream 4186 true Chr13: 30438618-30442803 Glycine max
Glyma.13G190900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 30441804-30442803 Glycine max
Glyma.13G190900 1.0kb downstream 1.0kb downstream 4186 true Chr13: 30437618-30441803 Glycine max
Glyma.13G190900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 30437618-30438617 Glycine max
Glyma.13G190900 2.0kb upstream 2.0kb upstream 5186 true Chr13: 30438618-30443803 Glycine max
Glyma.13G190900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 30441804-30443803 Glycine max
Glyma.13G190900 2.0kb downstream 2.0kb downstream 5186 true Chr13: 30436618-30441803 Glycine max
Glyma.13G190900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 30436618-30438617 Glycine max
Glyma.13G190900 5.0kb upstream 5.0kb upstream 8186 true Chr13: 30438618-30446803 Glycine max
Glyma.13G190900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 30441804-30446803 Glycine max
Glyma.13G190900 5.0kb downstream 5.0kb downstream 8186 true Chr13: 30433618-30441803 Glycine max
Glyma.13G190900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 30433618-30438617 Glycine max
Glyma.13G190900 10.0kb upstream 10.0kb upstream 13186 true Chr13: 30438618-30451803 Glycine max
Glyma.13G190900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 30441804-30451803 Glycine max
Glyma.13G190900 10.0kb downstream 10.0kb downstream 13186 true Chr13: 30428618-30441803 Glycine max
Glyma.13G190900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 30428618-30438617 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122298262 5265 Fabidae View MSA
124064191 5270 Rosid View MSA
123740275 5271 Pentapetalae View MSA
122796952 5272 Eudicot View MSA
122051695 5273 Angiosperm View MSA
123428894 5275 Viridiplantae View MSA
121348112 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6538 0.0 45.7351    
cufflinks 18.392 0.0 65.2252    
cufflinks 8.48323 0.0 35.0156   Low
cufflinks 12.6725 0.0 47.5409    
cufflinks 15.884 0.0 70.9452    
cufflinks 12.3527 0.0 51.9058    
cufflinks 29.2821 0.0 112.616 High High
cufflinks 12.9043 0.0 59.2946    
cufflinks 16.5413 0.0 59.1979    
cufflinks 0.683        
cufflinks 0.61       Low
cufflinks 0.957        
cufflinks 1.061        
cufflinks 1.635       High
cufflinks 1.14        
cufflinks 1.028        
cufflinks 0.64       Low
cufflinks 1.031        
cufflinks 1.33       High
cufflinks 1.16        
cufflinks 0.576       Low
cufflinks 1.142        
cufflinks 1.011        
cufflinks 0.57       Low
cufflinks 1.242        
cufflinks 0.537       Low

0 Strain