Gene : Glyma.13G179100 G. max Wm82.a2.v1
Defline:  (1 of 3) 6.5.1.4 - RNA 3'-terminal-phosphate cyclase (ATP) / RNA-3'-phosphate cyclase Genomic Order:  1791
Name:  ? Glyma.13G179100 Secondary Identifier:  ? PAC:30502514
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G179100 0.5kb upstream 0.5kb upstream 3949 true Chr13: 29265973-29269921 Glycine max
Glyma.13G179100 0.5kb upstream 0.5kb upstream 500 false Chr13: 29269422-29269921 Glycine max
Glyma.13G179100 0.5kb downstream 0.5kb downstream 3949 true Chr13: 29265473-29269421 Glycine max
Glyma.13G179100 0.5kb downstream 0.5kb downstream 500 false Chr13: 29265473-29265972 Glycine max
Glyma.13G179100 1.0kb upstream 1.0kb upstream 4449 true Chr13: 29265973-29270421 Glycine max
Glyma.13G179100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29269422-29270421 Glycine max
Glyma.13G179100 1.0kb downstream 1.0kb downstream 4449 true Chr13: 29264973-29269421 Glycine max
Glyma.13G179100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29264973-29265972 Glycine max
Glyma.13G179100 2.0kb upstream 2.0kb upstream 5449 true Chr13: 29265973-29271421 Glycine max
Glyma.13G179100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29269422-29271421 Glycine max
Glyma.13G179100 2.0kb downstream 2.0kb downstream 5449 true Chr13: 29263973-29269421 Glycine max
Glyma.13G179100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29263973-29265972 Glycine max
Glyma.13G179100 5.0kb upstream 5.0kb upstream 8449 true Chr13: 29265973-29274421 Glycine max
Glyma.13G179100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29269422-29274421 Glycine max
Glyma.13G179100 5.0kb downstream 5.0kb downstream 8449 true Chr13: 29260973-29269421 Glycine max
Glyma.13G179100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29260973-29265972 Glycine max
Glyma.13G179100 10.0kb upstream 10.0kb upstream 13449 true Chr13: 29265973-29279421 Glycine max
Glyma.13G179100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29269422-29279421 Glycine max
Glyma.13G179100 10.0kb downstream 10.0kb downstream 13449 true Chr13: 29255973-29269421 Glycine max
Glyma.13G179100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29255973-29265972 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026420 5273 Angiosperm View MSA
122302712 5265 Fabidae View MSA
124066416 5270 Rosid View MSA
123740049 5271 Pentapetalae View MSA
122791939 5272 Eudicot View MSA
121344300 5274 Embryophyte View MSA
123427148 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.4204 0.0 64.3625   High
cufflinks 12.2029 0.0 36.1424    
cufflinks 11.9753 0.0 41.0354    
cufflinks 11.3912 0.0 39.1674   Low
cufflinks 22.3573 0.0 74.6349 High High
cufflinks 16.6311 0.0 55.6647    
cufflinks 15.4133 0.0 51.7116    
cufflinks 15.698 0.0 52.3124    
cufflinks 13.3115 0.0 44.9856    
cufflinks 3.798        
cufflinks 1.592       Low
cufflinks 4.081        
cufflinks 6.659       High
cufflinks 9.59     High High
cufflinks 3.017        
cufflinks 3.749        
cufflinks 2.125       Low
cufflinks 4.177        
cufflinks 5.334        
cufflinks 3.059        
cufflinks 2.837        
cufflinks 2.974        
cufflinks 4.252        
cufflinks 2.411        
cufflinks 3.121        
cufflinks 3.248        

0 Strain