Gene : Glyma.13G179500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR21349:SF0 - 39S RIBOSOMAL PROTEIN L21, MITOCHONDRIAL Genomic Order:  1795
Name:  ? Glyma.13G179500 Secondary Identifier:  ? PAC:30501392
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G179500 0.5kb upstream 0.5kb upstream 3723 true Chr13: 29305199-29308921 Glycine max
Glyma.13G179500 0.5kb upstream 0.5kb upstream 500 false Chr13: 29305199-29305698 Glycine max
Glyma.13G179500 0.5kb downstream 0.5kb downstream 3723 true Chr13: 29305699-29309421 Glycine max
Glyma.13G179500 0.5kb downstream 0.5kb downstream 500 false Chr13: 29308922-29309421 Glycine max
Glyma.13G179500 1.0kb upstream 1.0kb upstream 4223 true Chr13: 29304699-29308921 Glycine max
Glyma.13G179500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29304699-29305698 Glycine max
Glyma.13G179500 1.0kb downstream 1.0kb downstream 4223 true Chr13: 29305699-29309921 Glycine max
Glyma.13G179500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29308922-29309921 Glycine max
Glyma.13G179500 2.0kb upstream 2.0kb upstream 5223 true Chr13: 29303699-29308921 Glycine max
Glyma.13G179500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29303699-29305698 Glycine max
Glyma.13G179500 2.0kb downstream 2.0kb downstream 5223 true Chr13: 29305699-29310921 Glycine max
Glyma.13G179500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29308922-29310921 Glycine max
Glyma.13G179500 5.0kb upstream 5.0kb upstream 8223 true Chr13: 29300699-29308921 Glycine max
Glyma.13G179500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29300699-29305698 Glycine max
Glyma.13G179500 5.0kb downstream 5.0kb downstream 8223 true Chr13: 29305699-29313921 Glycine max
Glyma.13G179500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29308922-29313921 Glycine max
Glyma.13G179500 10.0kb upstream 10.0kb upstream 13223 true Chr13: 29295699-29308921 Glycine max
Glyma.13G179500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29295699-29305698 Glycine max
Glyma.13G179500 10.0kb downstream 10.0kb downstream 13223 true Chr13: 29305699-29318921 Glycine max
Glyma.13G179500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29308922-29318921 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306663 5265 Fabidae View MSA
124069865 5270 Rosid View MSA
123750410 5271 Pentapetalae View MSA
122791775 5272 Eudicot View MSA
122045710 5273 Angiosperm View MSA
121350514 5274 Embryophyte View MSA
123424430 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.05413 0.0 37.2407    
cufflinks 10.8407 0.0 35.6863    
cufflinks 4.37915 0.0 19.8612   Low
cufflinks 8.61396 0.0 30.0261    
cufflinks 12.9408 0.0 50.4853   High
cufflinks 10.3958 0.0 34.6975    
cufflinks 8.29596 0.0 39.5499    
cufflinks 10.1835 0.0 41.4995    
cufflinks 8.88863 0.0 37.6528    
cufflinks 1.658        
cufflinks 0.539       Low
cufflinks 1.472        
cufflinks 2.993       High
cufflinks 4.379       High
cufflinks 1.015        
cufflinks 1.824        
cufflinks 0.813        
cufflinks 1.771        
cufflinks 2.252        
cufflinks 1.746        
cufflinks 0.756       Low
cufflinks 1.701        
cufflinks 2.305        
cufflinks 0.477       Low
cufflinks 1.784        
cufflinks 0.747       Low

0 Strain