Gene : Glyma.13G179800 G. max Wm82.a2.v1
Genomic Order:  1798 Name:  ? Glyma.13G179800
Secondary Identifier:  ? PAC:30505315
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G179800 0.5kb upstream 0.5kb upstream 2598 true Chr13: 29327439-29330036 Glycine max
Glyma.13G179800 0.5kb upstream 0.5kb upstream 500 false Chr13: 29329537-29330036 Glycine max
Glyma.13G179800 0.5kb downstream 0.5kb downstream 2598 true Chr13: 29326939-29329536 Glycine max
Glyma.13G179800 0.5kb downstream 0.5kb downstream 500 false Chr13: 29326939-29327438 Glycine max
Glyma.13G179800 1.0kb upstream 1.0kb upstream 3098 true Chr13: 29327439-29330536 Glycine max
Glyma.13G179800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29329537-29330536 Glycine max
Glyma.13G179800 1.0kb downstream 1.0kb downstream 3098 true Chr13: 29326439-29329536 Glycine max
Glyma.13G179800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29326439-29327438 Glycine max
Glyma.13G179800 2.0kb upstream 2.0kb upstream 4098 true Chr13: 29327439-29331536 Glycine max
Glyma.13G179800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29329537-29331536 Glycine max
Glyma.13G179800 2.0kb downstream 2.0kb downstream 4098 true Chr13: 29325439-29329536 Glycine max
Glyma.13G179800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29325439-29327438 Glycine max
Glyma.13G179800 5.0kb upstream 5.0kb upstream 7098 true Chr13: 29327439-29334536 Glycine max
Glyma.13G179800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29329537-29334536 Glycine max
Glyma.13G179800 5.0kb downstream 5.0kb downstream 7098 true Chr13: 29322439-29329536 Glycine max
Glyma.13G179800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29322439-29327438 Glycine max
Glyma.13G179800 10.0kb upstream 10.0kb upstream 12098 true Chr13: 29327439-29339536 Glycine max
Glyma.13G179800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29329537-29339536 Glycine max
Glyma.13G179800 10.0kb downstream 10.0kb downstream 12098 true Chr13: 29317439-29329536 Glycine max
Glyma.13G179800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29317439-29327438 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306757 5265 Fabidae View MSA
124060718 5270 Rosid View MSA
123750061 5271 Pentapetalae View MSA
122773449 5272 Eudicot View MSA
122045260 5273 Angiosperm View MSA
121310425 5274 Embryophyte View MSA
123347913 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0181616 0.0 0.0821362 Low Low
cufflinks 1.04093 0.0 3.76857   High
cufflinks 0.0798355 0.0 0.32365 Low  
cufflinks 0.453135 0.0 1.7115    
cufflinks 0.214263 0.0 0.83668 Low  
cufflinks 0.546909 0.0 2.05204    
cufflinks 0.452027 0.0 1.71098    
cufflinks 0.452798 0.0 1.71003    
cufflinks 0.63545 0.0 2.36633    
cufflinks 0.289        
cufflinks 0.126        
cufflinks 0.229        
cufflinks 0.285        
cufflinks 0.255        
cufflinks 0.082       Low
cufflinks 0.312        
cufflinks 0.085       Low
cufflinks 0.282        
cufflinks 0.603       High
cufflinks 0.156        
cufflinks 0.142        
cufflinks 0.223        
cufflinks 0.366       High
cufflinks 0.109       Low
cufflinks 0.247        
cufflinks 0.248        

0 Strain