Gene : Glyma.13G180200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10015//PTHR10015:SF155 - HEAT SHOCK TRANSCRIPTION FACTOR Genomic Order:  1802
Name:  ? Glyma.13G180200 Secondary Identifier:  ? PAC:30501207
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G180200 0.5kb upstream 0.5kb upstream 2893 true Chr13: 29364104-29366996 Glycine max
Glyma.13G180200 0.5kb upstream 0.5kb upstream 500 false Chr13: 29364104-29364603 Glycine max
Glyma.13G180200 0.5kb downstream 0.5kb downstream 2893 true Chr13: 29364604-29367496 Glycine max
Glyma.13G180200 0.5kb downstream 0.5kb downstream 500 false Chr13: 29366997-29367496 Glycine max
Glyma.13G180200 1.0kb upstream 1.0kb upstream 3393 true Chr13: 29363604-29366996 Glycine max
Glyma.13G180200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29363604-29364603 Glycine max
Glyma.13G180200 1.0kb downstream 1.0kb downstream 3393 true Chr13: 29364604-29367996 Glycine max
Glyma.13G180200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29366997-29367996 Glycine max
Glyma.13G180200 2.0kb upstream 2.0kb upstream 4393 true Chr13: 29362604-29366996 Glycine max
Glyma.13G180200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29362604-29364603 Glycine max
Glyma.13G180200 2.0kb downstream 2.0kb downstream 4393 true Chr13: 29364604-29368996 Glycine max
Glyma.13G180200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29366997-29368996 Glycine max
Glyma.13G180200 5.0kb upstream 5.0kb upstream 7393 true Chr13: 29359604-29366996 Glycine max
Glyma.13G180200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29359604-29364603 Glycine max
Glyma.13G180200 5.0kb downstream 5.0kb downstream 7393 true Chr13: 29364604-29371996 Glycine max
Glyma.13G180200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29366997-29371996 Glycine max
Glyma.13G180200 10.0kb upstream 10.0kb upstream 12393 true Chr13: 29354604-29366996 Glycine max
Glyma.13G180200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29354604-29364603 Glycine max
Glyma.13G180200 10.0kb downstream 10.0kb downstream 12393 true Chr13: 29364604-29376996 Glycine max
Glyma.13G180200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29366997-29376996 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309010 5265 Fabidae View MSA
124071098 5270 Rosid View MSA
123742443 5271 Pentapetalae View MSA
122794927 5272 Eudicot View MSA
122049182 5273 Angiosperm View MSA
121311284 5274 Embryophyte View MSA
123348598 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.290349 0.0 1.13708   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0161104 0.0 0.0762223 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.157282 0.0 0.629903 Low  
cufflinks 0.147887 0.0 0.593686 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0525611 0.0 0.224008 Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.385        
cufflinks 0.006     Low Low
cufflinks 0.099        
cufflinks 0.023     Low  
cufflinks 0.009     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.453        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.2        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 0.611        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.573       High

0 Strain