Gene : Glyma.13G181500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10639:SF7 - CLATHRIN LIGHT CHAIN Genomic Order:  1815
Name:  ? Glyma.13G181500 Secondary Identifier:  ? PAC:30504269
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G181500 0.5kb upstream 0.5kb upstream 3045 true Chr13: 29472110-29475154 Glycine max
Glyma.13G181500 0.5kb upstream 0.5kb upstream 500 false Chr13: 29474655-29475154 Glycine max
Glyma.13G181500 0.5kb downstream 0.5kb downstream 3045 true Chr13: 29471610-29474654 Glycine max
Glyma.13G181500 0.5kb downstream 0.5kb downstream 500 false Chr13: 29471610-29472109 Glycine max
Glyma.13G181500 1.0kb upstream 1.0kb upstream 3545 true Chr13: 29472110-29475654 Glycine max
Glyma.13G181500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29474655-29475654 Glycine max
Glyma.13G181500 1.0kb downstream 1.0kb downstream 3545 true Chr13: 29471110-29474654 Glycine max
Glyma.13G181500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29471110-29472109 Glycine max
Glyma.13G181500 2.0kb upstream 2.0kb upstream 4545 true Chr13: 29472110-29476654 Glycine max
Glyma.13G181500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29474655-29476654 Glycine max
Glyma.13G181500 2.0kb downstream 2.0kb downstream 4545 true Chr13: 29470110-29474654 Glycine max
Glyma.13G181500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29470110-29472109 Glycine max
Glyma.13G181500 5.0kb upstream 5.0kb upstream 7545 true Chr13: 29472110-29479654 Glycine max
Glyma.13G181500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29474655-29479654 Glycine max
Glyma.13G181500 5.0kb downstream 5.0kb downstream 7545 true Chr13: 29467110-29474654 Glycine max
Glyma.13G181500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29467110-29472109 Glycine max
Glyma.13G181500 10.0kb upstream 10.0kb upstream 12545 true Chr13: 29472110-29484654 Glycine max
Glyma.13G181500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29474655-29484654 Glycine max
Glyma.13G181500 10.0kb downstream 10.0kb downstream 12545 true Chr13: 29462110-29474654 Glycine max
Glyma.13G181500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29462110-29472109 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296653 5265 Fabidae View MSA
124061601 5270 Rosid View MSA
123752626 5271 Pentapetalae View MSA
122796141 5272 Eudicot View MSA
122042029 5273 Angiosperm View MSA
121347289 5274 Embryophyte View MSA
123426291 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.1427 0.0 38.2835    
cufflinks 21.972 0.0 58.6671 High  
cufflinks 6.75845 0.0 19.7204   Low
cufflinks 27.6087 0.0 73.7175 High  
cufflinks 39.2558 0.0 106.218 High  
cufflinks 39.1077 0.0 105.611 High  
cufflinks 11.4378 0.0 31.3859    
cufflinks 54.0892 0.0 149.371 High High
cufflinks 19.6657 0.0 52.5942 High  
cufflinks 32.576     High High
cufflinks 5.366        
cufflinks 4.639       Low
cufflinks 25.92     High High
cufflinks 31.669     High High
cufflinks 3.454       Low
cufflinks 9.88     High  
cufflinks 9.094     High  
cufflinks 8.688     High  
cufflinks 14.297     High  
cufflinks 7.37     High  
cufflinks 9.305     High  
cufflinks 7.966     High  
cufflinks 9.813     High  
cufflinks 6.924     High  
cufflinks 7.67     High  
cufflinks 9.624     High  

0 Strain