Gene : Glyma.13G182700 G. max Wm82.a2.v1
Defline:  (1 of 79) PF02701 - Dof domain, zinc finger (zf-Dof) Genomic Order:  1827
Name:  ? Glyma.13G182700 Secondary Identifier:  ? PAC:30505022
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G182700 0.5kb upstream 0.5kb upstream 2669 true Chr13: 29582280-29584948 Glycine max
Glyma.13G182700 0.5kb upstream 0.5kb upstream 500 false Chr13: 29582280-29582779 Glycine max
Glyma.13G182700 0.5kb downstream 0.5kb downstream 2669 true Chr13: 29582780-29585448 Glycine max
Glyma.13G182700 0.5kb downstream 0.5kb downstream 500 false Chr13: 29584949-29585448 Glycine max
Glyma.13G182700 1.0kb upstream 1.0kb upstream 3169 true Chr13: 29581780-29584948 Glycine max
Glyma.13G182700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29581780-29582779 Glycine max
Glyma.13G182700 1.0kb downstream 1.0kb downstream 3169 true Chr13: 29582780-29585948 Glycine max
Glyma.13G182700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29584949-29585948 Glycine max
Glyma.13G182700 2.0kb upstream 2.0kb upstream 4169 true Chr13: 29580780-29584948 Glycine max
Glyma.13G182700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29580780-29582779 Glycine max
Glyma.13G182700 2.0kb downstream 2.0kb downstream 4169 true Chr13: 29582780-29586948 Glycine max
Glyma.13G182700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29584949-29586948 Glycine max
Glyma.13G182700 5.0kb upstream 5.0kb upstream 7169 true Chr13: 29577780-29584948 Glycine max
Glyma.13G182700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29577780-29582779 Glycine max
Glyma.13G182700 5.0kb downstream 5.0kb downstream 7169 true Chr13: 29582780-29589948 Glycine max
Glyma.13G182700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29584949-29589948 Glycine max
Glyma.13G182700 10.0kb upstream 10.0kb upstream 12169 true Chr13: 29572780-29584948 Glycine max
Glyma.13G182700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29572780-29582779 Glycine max
Glyma.13G182700 10.0kb downstream 10.0kb downstream 12169 true Chr13: 29582780-29594948 Glycine max
Glyma.13G182700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29584949-29594948 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312129 5265 Fabidae View MSA
124070502 5270 Rosid View MSA
123743613 5271 Pentapetalae View MSA
122796456 5272 Eudicot View MSA
122050733 5273 Angiosperm View MSA
121349903 5274 Embryophyte View MSA
123427226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.59347 0.0 8.15616    
cufflinks 1.08115 0.0 3.7712   Low
cufflinks 2.58656 0.0 8.07551    
cufflinks 2.63996 0.0 8.23155    
cufflinks 6.27751 0.0 17.6235    
cufflinks 2.2319 0.0 7.16572    
cufflinks 1.02201 0.0 3.59023   Low
cufflinks 15.2739 0.0 40.7557   High
cufflinks 15.9058 0.0 42.4401   High
cufflinks 6.278        
cufflinks 9.347     High High
cufflinks 2.195        
cufflinks 10.853     High High
cufflinks 7.512     High  
cufflinks 5.255     High  
cufflinks 0.541       Low
cufflinks 9.218     High High
cufflinks 2.164        
cufflinks 1.026        
cufflinks 0.694       Low
cufflinks 6.047     High  
cufflinks 0.717       Low
cufflinks 0.796       Low
cufflinks 6.103     High  
cufflinks 0.471       Low
cufflinks 10.549     High High

0 Strain