Gene : Glyma.13G182900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12428//PTHR12428:SF23 - OXA1 Genomic Order:  1829
Name:  ? Glyma.13G182900 Secondary Identifier:  ? PAC:30503368
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G182900 0.5kb upstream 0.5kb upstream 7771 true Chr13: 29599366-29607136 Glycine max
Glyma.13G182900 0.5kb upstream 0.5kb upstream 500 false Chr13: 29599366-29599865 Glycine max
Glyma.13G182900 0.5kb downstream 0.5kb downstream 7771 true Chr13: 29599866-29607636 Glycine max
Glyma.13G182900 0.5kb downstream 0.5kb downstream 500 false Chr13: 29607137-29607636 Glycine max
Glyma.13G182900 1.0kb upstream 1.0kb upstream 8271 true Chr13: 29598866-29607136 Glycine max
Glyma.13G182900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29598866-29599865 Glycine max
Glyma.13G182900 1.0kb downstream 1.0kb downstream 8271 true Chr13: 29599866-29608136 Glycine max
Glyma.13G182900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29607137-29608136 Glycine max
Glyma.13G182900 2.0kb upstream 2.0kb upstream 9271 true Chr13: 29597866-29607136 Glycine max
Glyma.13G182900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29597866-29599865 Glycine max
Glyma.13G182900 2.0kb downstream 2.0kb downstream 9271 true Chr13: 29599866-29609136 Glycine max
Glyma.13G182900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29607137-29609136 Glycine max
Glyma.13G182900 5.0kb upstream 5.0kb upstream 12271 true Chr13: 29594866-29607136 Glycine max
Glyma.13G182900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29594866-29599865 Glycine max
Glyma.13G182900 5.0kb downstream 5.0kb downstream 12271 true Chr13: 29599866-29612136 Glycine max
Glyma.13G182900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29607137-29612136 Glycine max
Glyma.13G182900 10.0kb upstream 10.0kb upstream 17271 true Chr13: 29589866-29607136 Glycine max
Glyma.13G182900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29589866-29599865 Glycine max
Glyma.13G182900 10.0kb downstream 10.0kb downstream 17271 true Chr13: 29599866-29617136 Glycine max
Glyma.13G182900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29607137-29617136 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311244 5265 Fabidae View MSA
124065140 5270 Rosid View MSA
123750990 5271 Pentapetalae View MSA
122794726 5272 Eudicot View MSA
122051610 5273 Angiosperm View MSA
121347323 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.01987 0.0 41.3529    
cufflinks 8.69129 0.0 39.3802    
cufflinks 7.13917 0.0 33.7492   Low
cufflinks 7.76682 0.0 36.3349    
cufflinks 12.1428 0.0 52.7944   High
cufflinks 9.27207 0.0 38.6284    
cufflinks 6.85742 0.0 30.2299   Low
cufflinks 7.7988 0.0 36.7316    
cufflinks 11.2987 0.0 49.991   High
cufflinks 0.65        
cufflinks 0.225       Low
cufflinks 0.69        
cufflinks 0.939       High
cufflinks 1.19       High
cufflinks 0.366        
cufflinks 0.548        
cufflinks 0.558        
cufflinks 0.821        
cufflinks 0.789        
cufflinks 0.664        
cufflinks 0.26       Low
cufflinks 0.612        
cufflinks 0.741        
cufflinks 0.295       Low
cufflinks 0.58        
cufflinks 0.437        

0 Strain