Gene : Glyma.13G183000 G. max Wm82.a2.v1
Defline:  (1 of 3) 1.10.3.1//1.14.18.1 - Catechol oxidase / Tyrosinase // Tyrosinase / Tyrosine-dopa oxidase Genomic Order:  1830
Name:  ? Glyma.13G183000 Secondary Identifier:  ? PAC:30502667
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6481 Glycine max pathologic  
Gmax PWY-6752 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G183000 0.5kb upstream 0.5kb upstream 2391 true Chr13: 29615654-29618044 Glycine max
Glyma.13G183000 0.5kb upstream 0.5kb upstream 500 false Chr13: 29615654-29616153 Glycine max
Glyma.13G183000 0.5kb downstream 0.5kb downstream 2391 true Chr13: 29616154-29618544 Glycine max
Glyma.13G183000 0.5kb downstream 0.5kb downstream 500 false Chr13: 29618045-29618544 Glycine max
Glyma.13G183000 1.0kb upstream 1.0kb upstream 2891 true Chr13: 29615154-29618044 Glycine max
Glyma.13G183000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29615154-29616153 Glycine max
Glyma.13G183000 1.0kb downstream 1.0kb downstream 2891 true Chr13: 29616154-29619044 Glycine max
Glyma.13G183000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29618045-29619044 Glycine max
Glyma.13G183000 2.0kb upstream 2.0kb upstream 3891 true Chr13: 29614154-29618044 Glycine max
Glyma.13G183000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29614154-29616153 Glycine max
Glyma.13G183000 2.0kb downstream 2.0kb downstream 3891 true Chr13: 29616154-29620044 Glycine max
Glyma.13G183000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29618045-29620044 Glycine max
Glyma.13G183000 5.0kb upstream 5.0kb upstream 6891 true Chr13: 29611154-29618044 Glycine max
Glyma.13G183000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29611154-29616153 Glycine max
Glyma.13G183000 5.0kb downstream 5.0kb downstream 6891 true Chr13: 29616154-29623044 Glycine max
Glyma.13G183000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29618045-29623044 Glycine max
Glyma.13G183000 10.0kb upstream 10.0kb upstream 11891 true Chr13: 29606154-29618044 Glycine max
Glyma.13G183000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29606154-29616153 Glycine max
Glyma.13G183000 10.0kb downstream 10.0kb downstream 11891 true Chr13: 29616154-29628044 Glycine max
Glyma.13G183000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29618045-29628044 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027808 5273 Angiosperm View MSA
122315416 5265 Fabidae View MSA
124040679 5270 Rosid View MSA
123754116 5271 Pentapetalae View MSA
122798116 5272 Eudicot View MSA
121350975 5274 Embryophyte View MSA
123428097 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.106927 0.0 0.423048 Low Low
cufflinks 23.2833 0.0 62.2538 High  
cufflinks 2.81419 0.0 8.87738    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 43.1368 0.0 119.665 High  
cufflinks 44.8454 0.0 124.645 High  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 21.1078 0.0 56.3769 High  
cufflinks 92.5656 0.0 283.971 High  
cufflinks 6.566        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.806     High High
cufflinks 0.132       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.163        
cufflinks 2.237        
cufflinks 3.779        
cufflinks 5.958        
cufflinks 26.665     High High
cufflinks 0.163        
cufflinks 0.092       Low
cufflinks 0.367        
cufflinks 0.422        
cufflinks 0.337        
cufflinks 0.856        
cufflinks 0.044     Low Low

0 Strain