Gene : Glyma.13G184200 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR27001:SF91 - PROTEIN STRUBBELIG-RELATED Genomic Order:  1842
Name:  ? Glyma.13G184200 Secondary Identifier:  ? PAC:30500629
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G184200 0.5kb upstream 0.5kb upstream 11138 true Chr13: 29788864-29800001 Glycine max
Glyma.13G184200 0.5kb upstream 0.5kb upstream 500 false Chr13: 29788864-29789363 Glycine max
Glyma.13G184200 0.5kb downstream 0.5kb downstream 11138 true Chr13: 29789364-29800501 Glycine max
Glyma.13G184200 0.5kb downstream 0.5kb downstream 500 false Chr13: 29800002-29800501 Glycine max
Glyma.13G184200 1.0kb upstream 1.0kb upstream 11638 true Chr13: 29788364-29800001 Glycine max
Glyma.13G184200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29788364-29789363 Glycine max
Glyma.13G184200 1.0kb downstream 1.0kb downstream 11638 true Chr13: 29789364-29801001 Glycine max
Glyma.13G184200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29800002-29801001 Glycine max
Glyma.13G184200 2.0kb upstream 2.0kb upstream 12638 true Chr13: 29787364-29800001 Glycine max
Glyma.13G184200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29787364-29789363 Glycine max
Glyma.13G184200 2.0kb downstream 2.0kb downstream 12638 true Chr13: 29789364-29802001 Glycine max
Glyma.13G184200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29800002-29802001 Glycine max
Glyma.13G184200 5.0kb upstream 5.0kb upstream 15638 true Chr13: 29784364-29800001 Glycine max
Glyma.13G184200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29784364-29789363 Glycine max
Glyma.13G184200 5.0kb downstream 5.0kb downstream 15638 true Chr13: 29789364-29805001 Glycine max
Glyma.13G184200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29800002-29805001 Glycine max
Glyma.13G184200 10.0kb upstream 10.0kb upstream 20638 true Chr13: 29779364-29800001 Glycine max
Glyma.13G184200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29779364-29789363 Glycine max
Glyma.13G184200 10.0kb downstream 10.0kb downstream 20638 true Chr13: 29789364-29810001 Glycine max
Glyma.13G184200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29800002-29810001 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310177 5265 Fabidae View MSA
124064785 5270 Rosid View MSA
123746187 5271 Pentapetalae View MSA
122786537 5272 Eudicot View MSA
122051467 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348233 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.32292 0.0 2.05348   Low
cufflinks 2.58939 0.0 12.1247    
cufflinks 0.629576 0.0 3.55668    
cufflinks 4.71104 0.0 18.2191   High
cufflinks 1.18517 0.0 5.8898    
cufflinks 0.501059 0.0 2.29073   Low
cufflinks 4.93841 0.0 16.5386   High
cufflinks 2.44558 0.0 9.60947    
cufflinks 1.7729 0.0 10.8568    
cufflinks 0.338       High
cufflinks 0.013     Low Low
cufflinks 0.218        
cufflinks 0.124        
cufflinks 0.086        
cufflinks 0.016     Low Low
cufflinks 0.064     Low  
cufflinks 0.078        
cufflinks 0.607       High
cufflinks 0.234       High
cufflinks 0.071     Low  
cufflinks 0.022     Low Low
cufflinks 0.082     Low  
cufflinks 0.105        
cufflinks 0.019     Low Low
cufflinks 0.075     Low  
cufflinks 0.035     Low  

0 Strain