Gene : Glyma.13G228600 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22952//PTHR22952:SF143 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED Genomic Order:  2286
Name:  ? Glyma.13G228600 Secondary Identifier:  ? PAC:30501390
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G228600 0.5kb upstream 0.5kb upstream 1686 true Chr13: 34086207-34087892 Glycine max
Glyma.13G228600 0.5kb upstream 0.5kb upstream 500 false Chr13: 34086207-34086706 Glycine max
Glyma.13G228600 0.5kb downstream 0.5kb downstream 1686 true Chr13: 34086707-34088392 Glycine max
Glyma.13G228600 0.5kb downstream 0.5kb downstream 500 false Chr13: 34087893-34088392 Glycine max
Glyma.13G228600 1.0kb upstream 1.0kb upstream 2186 true Chr13: 34085707-34087892 Glycine max
Glyma.13G228600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34085707-34086706 Glycine max
Glyma.13G228600 1.0kb downstream 1.0kb downstream 2186 true Chr13: 34086707-34088892 Glycine max
Glyma.13G228600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34087893-34088892 Glycine max
Glyma.13G228600 2.0kb upstream 2.0kb upstream 3186 true Chr13: 34084707-34087892 Glycine max
Glyma.13G228600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34084707-34086706 Glycine max
Glyma.13G228600 2.0kb downstream 2.0kb downstream 3186 true Chr13: 34086707-34089892 Glycine max
Glyma.13G228600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34087893-34089892 Glycine max
Glyma.13G228600 5.0kb upstream 5.0kb upstream 6186 true Chr13: 34081707-34087892 Glycine max
Glyma.13G228600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34081707-34086706 Glycine max
Glyma.13G228600 5.0kb downstream 5.0kb downstream 6186 true Chr13: 34086707-34092892 Glycine max
Glyma.13G228600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34087893-34092892 Glycine max
Glyma.13G228600 10.0kb upstream 10.0kb upstream 11186 true Chr13: 34076707-34087892 Glycine max
Glyma.13G228600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34076707-34086706 Glycine max
Glyma.13G228600 10.0kb downstream 10.0kb downstream 11186 true Chr13: 34086707-34097892 Glycine max
Glyma.13G228600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34087893-34097892 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309944 5265 Fabidae View MSA
124070916 5270 Rosid View MSA
123746178 5271 Pentapetalae View MSA
122797836 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0152998 0.0 0.0693847 Low Low
cufflinks 0.0677042 0.0 0.274471 Low  
cufflinks 0.386753 0.0 1.46182    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.47873 0.0 16.0732   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low  
cufflinks 0.05     Low  
cufflinks 0.014     Low  
cufflinks 0.01     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.167       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.028     Low  

0 Strain