Gene : Glyma.13G229700 G. max Wm82.a2.v1
Defline:  (1 of 25) PF04852 - Protein of unknown function (DUF640) (DUF640) Genomic Order:  2297
Name:  ? Glyma.13G229700 Secondary Identifier:  ? PAC:30504559
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G229700 0.5kb upstream 0.5kb upstream 6594 true Chr13: 34177848-34184441 Glycine max
Glyma.13G229700 0.5kb upstream 0.5kb upstream 500 false Chr13: 34183942-34184441 Glycine max
Glyma.13G229700 0.5kb downstream 0.5kb downstream 6594 true Chr13: 34177348-34183941 Glycine max
Glyma.13G229700 0.5kb downstream 0.5kb downstream 500 false Chr13: 34177348-34177847 Glycine max
Glyma.13G229700 1.0kb upstream 1.0kb upstream 7094 true Chr13: 34177848-34184941 Glycine max
Glyma.13G229700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34183942-34184941 Glycine max
Glyma.13G229700 1.0kb downstream 1.0kb downstream 7094 true Chr13: 34176848-34183941 Glycine max
Glyma.13G229700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34176848-34177847 Glycine max
Glyma.13G229700 2.0kb upstream 2.0kb upstream 8094 true Chr13: 34177848-34185941 Glycine max
Glyma.13G229700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34183942-34185941 Glycine max
Glyma.13G229700 2.0kb downstream 2.0kb downstream 8094 true Chr13: 34175848-34183941 Glycine max
Glyma.13G229700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34175848-34177847 Glycine max
Glyma.13G229700 5.0kb upstream 5.0kb upstream 11094 true Chr13: 34177848-34188941 Glycine max
Glyma.13G229700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34183942-34188941 Glycine max
Glyma.13G229700 5.0kb downstream 5.0kb downstream 11094 true Chr13: 34172848-34183941 Glycine max
Glyma.13G229700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34172848-34177847 Glycine max
Glyma.13G229700 10.0kb upstream 10.0kb upstream 16094 true Chr13: 34177848-34193941 Glycine max
Glyma.13G229700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34183942-34193941 Glycine max
Glyma.13G229700 10.0kb downstream 10.0kb downstream 16094 true Chr13: 34167848-34183941 Glycine max
Glyma.13G229700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34167848-34177847 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792183 5273 Angiosperm View MSA
122304209 5265 Fabidae View MSA
124074351 5270 Rosid View MSA
123750207 5271 Pentapetalae View MSA
122796804 5272 Eudicot View MSA
121063429 5274 Embryophyte View MSA
123103178 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.10532 0.0 3.97726    
cufflinks 4.23409 0.0 13.163    
cufflinks 1.46637 0.0 5.18067    
cufflinks 6.52671 0.0 19.1044    
cufflinks 8.61244 0.0 24.2623    
cufflinks 19.9114 0.0 53.2498    
cufflinks 0.134884 0.0 0.534628 Low Low
cufflinks 52.579 0.0 144.393 High High
cufflinks 6.74925 0.0 19.612    
cufflinks 1.922       High
cufflinks 0.19        
cufflinks 0.211        
cufflinks 0.855       High
cufflinks 0.128        
cufflinks 0.196        
cufflinks 0.212        
cufflinks 1.546       High
cufflinks 0.08     Low Low
cufflinks 0.264        
cufflinks 0.081     Low Low
cufflinks 0.698        
cufflinks 0.168        
cufflinks 0.11        
cufflinks 0.559        
cufflinks 0.182        
cufflinks 0.248        

0 Strain