Gene : Glyma.13G230800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR32285:SF15 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 37-RELATED Genomic Order:  2308
Name:  ? Glyma.13G230800 Secondary Identifier:  ? PAC:30502056
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G230800 0.5kb upstream 0.5kb upstream 5720 true Chr13: 34263691-34269410 Glycine max
Glyma.13G230800 0.5kb upstream 0.5kb upstream 500 false Chr13: 34263691-34264190 Glycine max
Glyma.13G230800 0.5kb downstream 0.5kb downstream 5720 true Chr13: 34264191-34269910 Glycine max
Glyma.13G230800 0.5kb downstream 0.5kb downstream 500 false Chr13: 34269411-34269910 Glycine max
Glyma.13G230800 1.0kb upstream 1.0kb upstream 6220 true Chr13: 34263191-34269410 Glycine max
Glyma.13G230800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34263191-34264190 Glycine max
Glyma.13G230800 1.0kb downstream 1.0kb downstream 6220 true Chr13: 34264191-34270410 Glycine max
Glyma.13G230800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34269411-34270410 Glycine max
Glyma.13G230800 2.0kb upstream 2.0kb upstream 7220 true Chr13: 34262191-34269410 Glycine max
Glyma.13G230800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34262191-34264190 Glycine max
Glyma.13G230800 2.0kb downstream 2.0kb downstream 7220 true Chr13: 34264191-34271410 Glycine max
Glyma.13G230800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34269411-34271410 Glycine max
Glyma.13G230800 5.0kb upstream 5.0kb upstream 10220 true Chr13: 34259191-34269410 Glycine max
Glyma.13G230800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34259191-34264190 Glycine max
Glyma.13G230800 5.0kb downstream 5.0kb downstream 10220 true Chr13: 34264191-34274410 Glycine max
Glyma.13G230800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34269411-34274410 Glycine max
Glyma.13G230800 10.0kb upstream 10.0kb upstream 15220 true Chr13: 34254191-34269410 Glycine max
Glyma.13G230800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34254191-34264190 Glycine max
Glyma.13G230800 10.0kb downstream 10.0kb downstream 15220 true Chr13: 34264191-34279410 Glycine max
Glyma.13G230800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34269411-34279410 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310732 5265 Fabidae View MSA
124064716 5270 Rosid View MSA
123736732 5271 Pentapetalae View MSA
122797510 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.730105 0.0 5.17432    
cufflinks 3.15351 0.0 16.7127    
cufflinks 0.80216 0.0 4.81411    
cufflinks 2.06801 0.0 12.8163    
cufflinks 2.04122 0.0 10.2916    
cufflinks 0.559077 0.0 2.71913   Low
cufflinks 0.45629 0.0 3.8538   Low
cufflinks 5.00542 0.0 22.9631   High
cufflinks 5.66466 0.0 25.7205   High
cufflinks 0.665       High
cufflinks 0.088        
cufflinks 0.127        
cufflinks 0.262        
cufflinks 0.14        
cufflinks 0.032     Low Low
cufflinks 0.201        
cufflinks 0.24        
cufflinks 0.152        
cufflinks 0.328       High
cufflinks 0.135        
cufflinks 0.125        
cufflinks 0.168        
cufflinks 0.286        
cufflinks 0.061       Low
cufflinks 0.157        
cufflinks 0.184        

0 Strain