Gene : Glyma.13G231700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR18968//PTHR18968:SF132 - THIAMINE PYROPHOSPHATE ENZYMES Genomic Order:  2317
Name:  ? Glyma.13G231700 Secondary Identifier:  ? PAC:30504716
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-5486 Glycine max pathologic  
Gmax PWY-6330 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G231700 0.5kb upstream 0.5kb upstream 4794 true Chr13: 34322075-34326868 Glycine max
Glyma.13G231700 0.5kb upstream 0.5kb upstream 500 false Chr13: 34326369-34326868 Glycine max
Glyma.13G231700 0.5kb downstream 0.5kb downstream 4794 true Chr13: 34321575-34326368 Glycine max
Glyma.13G231700 0.5kb downstream 0.5kb downstream 500 false Chr13: 34321575-34322074 Glycine max
Glyma.13G231700 1.0kb upstream 1.0kb upstream 5294 true Chr13: 34322075-34327368 Glycine max
Glyma.13G231700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34326369-34327368 Glycine max
Glyma.13G231700 1.0kb downstream 1.0kb downstream 5294 true Chr13: 34321075-34326368 Glycine max
Glyma.13G231700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34321075-34322074 Glycine max
Glyma.13G231700 2.0kb upstream 2.0kb upstream 6294 true Chr13: 34322075-34328368 Glycine max
Glyma.13G231700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34326369-34328368 Glycine max
Glyma.13G231700 2.0kb downstream 2.0kb downstream 6294 true Chr13: 34320075-34326368 Glycine max
Glyma.13G231700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34320075-34322074 Glycine max
Glyma.13G231700 5.0kb upstream 5.0kb upstream 9294 true Chr13: 34322075-34331368 Glycine max
Glyma.13G231700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34326369-34331368 Glycine max
Glyma.13G231700 5.0kb downstream 5.0kb downstream 9294 true Chr13: 34317075-34326368 Glycine max
Glyma.13G231700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34317075-34322074 Glycine max
Glyma.13G231700 10.0kb upstream 10.0kb upstream 14294 true Chr13: 34322075-34336368 Glycine max
Glyma.13G231700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34326369-34336368 Glycine max
Glyma.13G231700 10.0kb downstream 10.0kb downstream 14294 true Chr13: 34312075-34326368 Glycine max
Glyma.13G231700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34312075-34322074 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791820 5273 Angiosperm View MSA
122302892 5265 Fabidae View MSA
124070519 5270 Rosid View MSA
123742600 5271 Pentapetalae View MSA
122794163 5272 Eudicot View MSA
121351042 5274 Embryophyte View MSA
123426958 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.0322 0.0 139.834 High  
cufflinks 7.06867 0.0 25.4148   Low
cufflinks 8.10577 0.0 24.7718   Low
cufflinks 11.7342 0.0 39.6425    
cufflinks 35.8265 0.0 139.69 High  
cufflinks 11.578 0.0 39.3293    
cufflinks 31.2939 0.0 117.725 High  
cufflinks 16.932 0.0 58.1626    
cufflinks 52.9835 0.0 196.005 High High
cufflinks 6.254        
cufflinks 397.012     High High
cufflinks 3.473        
cufflinks 8.475     High  
cufflinks 6.139        
cufflinks 305.701     High High
cufflinks 1.342        
cufflinks 76.335     High  
cufflinks 3.564        
cufflinks 3.14        
cufflinks 0.754       Low
cufflinks 450.089     High High
cufflinks 0.947       Low
cufflinks 1.216        
cufflinks 231.526     High High
cufflinks 1.024       Low
cufflinks 278.372     High High

0 Strain