Gene : Glyma.13G232900 G. max Wm82.a2.v1
Defline:  (1 of 7) PF00271//PF04408//PF07717 - Helicase conserved C-terminal domain (Helicase_C) // Helicase associated domain (HA2) (HA2) // Oligonucleotide/oligosaccharide-binding (OB)-fold (OB_NTP_bind) Genomic Order:  2329
Name:  ? Glyma.13G232900 Secondary Identifier:  ? PAC:30501775
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G232900 0.5kb upstream 0.5kb upstream 11674 true Chr13: 34383110-34394783 Glycine max
Glyma.13G232900 0.5kb upstream 0.5kb upstream 500 false Chr13: 34394284-34394783 Glycine max
Glyma.13G232900 0.5kb downstream 0.5kb downstream 11674 true Chr13: 34382610-34394283 Glycine max
Glyma.13G232900 0.5kb downstream 0.5kb downstream 500 false Chr13: 34382610-34383109 Glycine max
Glyma.13G232900 1.0kb upstream 1.0kb upstream 12174 true Chr13: 34383110-34395283 Glycine max
Glyma.13G232900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34394284-34395283 Glycine max
Glyma.13G232900 1.0kb downstream 1.0kb downstream 12174 true Chr13: 34382110-34394283 Glycine max
Glyma.13G232900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34382110-34383109 Glycine max
Glyma.13G232900 2.0kb upstream 2.0kb upstream 13174 true Chr13: 34383110-34396283 Glycine max
Glyma.13G232900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34394284-34396283 Glycine max
Glyma.13G232900 2.0kb downstream 2.0kb downstream 13174 true Chr13: 34381110-34394283 Glycine max
Glyma.13G232900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34381110-34383109 Glycine max
Glyma.13G232900 5.0kb upstream 5.0kb upstream 16174 true Chr13: 34383110-34399283 Glycine max
Glyma.13G232900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34394284-34399283 Glycine max
Glyma.13G232900 5.0kb downstream 5.0kb downstream 16174 true Chr13: 34378110-34394283 Glycine max
Glyma.13G232900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34378110-34383109 Glycine max
Glyma.13G232900 10.0kb upstream 10.0kb upstream 21174 true Chr13: 34383110-34404283 Glycine max
Glyma.13G232900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34394284-34404283 Glycine max
Glyma.13G232900 10.0kb downstream 10.0kb downstream 21174 true Chr13: 34373110-34394283 Glycine max
Glyma.13G232900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34373110-34383109 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303814 5265 Fabidae View MSA
124063134 5270 Rosid View MSA
123738993 5271 Pentapetalae View MSA
122793232 5272 Eudicot View MSA
122042345 5273 Angiosperm View MSA
121344460 5274 Embryophyte View MSA
123427564 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.0238 0.0 19.2929    
cufflinks 8.92927 0.0 24.1552    
cufflinks 11.595 0.0 31.024   High
cufflinks 6.85862 0.0 18.8696    
cufflinks 7.16002 0.0 19.6319    
cufflinks 4.94189 0.0 14.0342   Low
cufflinks 11.1852 0.0 29.9893   High
cufflinks 6.46278 0.0 17.8622    
cufflinks 7.86118 0.0 21.4108    
cufflinks 1.151        
cufflinks 0.572       Low
cufflinks 2.279        
cufflinks 2.011        
cufflinks 2.315        
cufflinks 0.87       Low
cufflinks 2.503        
cufflinks 0.91        
cufflinks 1.683        
cufflinks 2.681        
cufflinks 2.789       High
cufflinks 0.744       Low
cufflinks 2.861       High
cufflinks 2.414        
cufflinks 0.835       Low
cufflinks 2.404        
cufflinks 0.855       Low

0 Strain