Gene : Glyma.13G234000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR12599:SF2 - PCD/DCOH-LIKE PROTEIN 2 Genomic Order:  2340
Name:  ? Glyma.13G234000 Secondary Identifier:  ? PAC:30500762
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G234000 0.5kb upstream 0.5kb upstream 3651 true Chr13: 34470267-34473917 Glycine max
Glyma.13G234000 0.5kb upstream 0.5kb upstream 500 false Chr13: 34470267-34470766 Glycine max
Glyma.13G234000 0.5kb downstream 0.5kb downstream 3651 true Chr13: 34470767-34474417 Glycine max
Glyma.13G234000 0.5kb downstream 0.5kb downstream 500 false Chr13: 34473918-34474417 Glycine max
Glyma.13G234000 1.0kb upstream 1.0kb upstream 4151 true Chr13: 34469767-34473917 Glycine max
Glyma.13G234000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34469767-34470766 Glycine max
Glyma.13G234000 1.0kb downstream 1.0kb downstream 4151 true Chr13: 34470767-34474917 Glycine max
Glyma.13G234000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34473918-34474917 Glycine max
Glyma.13G234000 2.0kb upstream 2.0kb upstream 5151 true Chr13: 34468767-34473917 Glycine max
Glyma.13G234000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34468767-34470766 Glycine max
Glyma.13G234000 2.0kb downstream 2.0kb downstream 5151 true Chr13: 34470767-34475917 Glycine max
Glyma.13G234000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34473918-34475917 Glycine max
Glyma.13G234000 5.0kb upstream 5.0kb upstream 8151 true Chr13: 34465767-34473917 Glycine max
Glyma.13G234000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34465767-34470766 Glycine max
Glyma.13G234000 5.0kb downstream 5.0kb downstream 8151 true Chr13: 34470767-34478917 Glycine max
Glyma.13G234000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34473918-34478917 Glycine max
Glyma.13G234000 10.0kb upstream 10.0kb upstream 13151 true Chr13: 34460767-34473917 Glycine max
Glyma.13G234000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34460767-34470766 Glycine max
Glyma.13G234000 10.0kb downstream 10.0kb downstream 13151 true Chr13: 34470767-34483917 Glycine max
Glyma.13G234000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34473918-34483917 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240904 5265 Fabidae Singleton cluster - no MSA
124068632 5270 Rosid View MSA
123742816 5271 Pentapetalae View MSA
122797926 5272 Eudicot View MSA
122046446 5273 Angiosperm View MSA
121348467 5274 Embryophyte View MSA
123427509 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.53748 0.0 9.50337   High
cufflinks 1.95505 0.0 7.40319    
cufflinks 2.57388 0.0 9.60353   High
cufflinks 1.08503 0.0 4.20723    
cufflinks 0.773024 0.0 3.03603   Low
cufflinks 1.04573 0.0 4.06851    
cufflinks 1.26945 0.0 4.88736    
cufflinks 1.34433 0.0 5.15938    
cufflinks 2.35441 0.0 8.8316    
cufflinks 0.377        
cufflinks 0.209       Low
cufflinks 1.245       High
cufflinks 0.86       High
cufflinks 0.674        
cufflinks 0.148       Low
cufflinks 0.473        
cufflinks 0.331        
cufflinks 1.044       High
cufflinks 0.837        
cufflinks 0.504        
cufflinks 0.206       Low
cufflinks 0.599        
cufflinks 0.725        
cufflinks 0.276        
cufflinks 0.527        
cufflinks 0.302        

0 Strain