Gene : Glyma.13G221000 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11214:SF92 - BETA-1,3-GALACTOSYLTRANSFERASE 20-RELATED Genomic Order:  2210
Name:  ? Glyma.13G221000 Secondary Identifier:  ? PAC:30502053
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G221000 0.5kb upstream 0.5kb upstream 7325 true Chr13: 33409269-33416593 Glycine max
Glyma.13G221000 0.5kb upstream 0.5kb upstream 500 false Chr13: 33416094-33416593 Glycine max
Glyma.13G221000 0.5kb downstream 0.5kb downstream 7325 true Chr13: 33408769-33416093 Glycine max
Glyma.13G221000 0.5kb downstream 0.5kb downstream 500 false Chr13: 33408769-33409268 Glycine max
Glyma.13G221000 1.0kb upstream 1.0kb upstream 7825 true Chr13: 33409269-33417093 Glycine max
Glyma.13G221000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 33416094-33417093 Glycine max
Glyma.13G221000 1.0kb downstream 1.0kb downstream 7825 true Chr13: 33408269-33416093 Glycine max
Glyma.13G221000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 33408269-33409268 Glycine max
Glyma.13G221000 2.0kb upstream 2.0kb upstream 8825 true Chr13: 33409269-33418093 Glycine max
Glyma.13G221000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 33416094-33418093 Glycine max
Glyma.13G221000 2.0kb downstream 2.0kb downstream 8825 true Chr13: 33407269-33416093 Glycine max
Glyma.13G221000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 33407269-33409268 Glycine max
Glyma.13G221000 5.0kb upstream 5.0kb upstream 11825 true Chr13: 33409269-33421093 Glycine max
Glyma.13G221000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 33416094-33421093 Glycine max
Glyma.13G221000 5.0kb downstream 5.0kb downstream 11825 true Chr13: 33404269-33416093 Glycine max
Glyma.13G221000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 33404269-33409268 Glycine max
Glyma.13G221000 10.0kb upstream 10.0kb upstream 16825 true Chr13: 33409269-33426093 Glycine max
Glyma.13G221000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 33416094-33426093 Glycine max
Glyma.13G221000 10.0kb downstream 10.0kb downstream 16825 true Chr13: 33399269-33416093 Glycine max
Glyma.13G221000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 33399269-33409268 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306660 5265 Fabidae View MSA
124064746 5270 Rosid View MSA
123750268 5271 Pentapetalae View MSA
122792852 5272 Eudicot View MSA
122049644 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.31528 0.0 4.27715    
cufflinks 2.85468 0.0 8.33129    
cufflinks 0.757501 0.0 2.61856   Low
cufflinks 4.4158 0.0 12.2641    
cufflinks 3.83878 0.0 10.8256    
cufflinks 8.57771 0.0 22.9451   High
cufflinks 1.38119 0.0 4.45973    
cufflinks 4.71445 0.0 13.0145    
cufflinks 3.11244 0.0 8.97451    
cufflinks 3.305       High
cufflinks 0.878        
cufflinks 1.131        
cufflinks 2.922       High
cufflinks 3.412       High
cufflinks 0.256       Low
cufflinks 1.515        
cufflinks 0.678       Low
cufflinks 2.45        
cufflinks 1.945        
cufflinks 1.008        
cufflinks 1.161        
cufflinks 1.377        
cufflinks 1.52        
cufflinks 0.867        
cufflinks 1.264        
cufflinks 0.838        

0 Strain