Gene : Glyma.13G221200 G. max Wm82.a2.v1
Defline:  (1 of 40) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  2212
Name:  ? Glyma.13G221200 Secondary Identifier:  ? PAC:30505785
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G221200 0.5kb upstream 0.5kb upstream 4037 true Chr13: 33422605-33426641 Glycine max
Glyma.13G221200 0.5kb upstream 0.5kb upstream 500 false Chr13: 33426142-33426641 Glycine max
Glyma.13G221200 0.5kb downstream 0.5kb downstream 4037 true Chr13: 33422105-33426141 Glycine max
Glyma.13G221200 0.5kb downstream 0.5kb downstream 500 false Chr13: 33422105-33422604 Glycine max
Glyma.13G221200 1.0kb upstream 1.0kb upstream 4537 true Chr13: 33422605-33427141 Glycine max
Glyma.13G221200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 33426142-33427141 Glycine max
Glyma.13G221200 1.0kb downstream 1.0kb downstream 4537 true Chr13: 33421605-33426141 Glycine max
Glyma.13G221200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 33421605-33422604 Glycine max
Glyma.13G221200 2.0kb upstream 2.0kb upstream 5537 true Chr13: 33422605-33428141 Glycine max
Glyma.13G221200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 33426142-33428141 Glycine max
Glyma.13G221200 2.0kb downstream 2.0kb downstream 5537 true Chr13: 33420605-33426141 Glycine max
Glyma.13G221200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 33420605-33422604 Glycine max
Glyma.13G221200 5.0kb upstream 5.0kb upstream 8537 true Chr13: 33422605-33431141 Glycine max
Glyma.13G221200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 33426142-33431141 Glycine max
Glyma.13G221200 5.0kb downstream 5.0kb downstream 8537 true Chr13: 33417605-33426141 Glycine max
Glyma.13G221200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 33417605-33422604 Glycine max
Glyma.13G221200 10.0kb upstream 10.0kb upstream 13537 true Chr13: 33422605-33436141 Glycine max
Glyma.13G221200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 33426142-33436141 Glycine max
Glyma.13G221200 10.0kb downstream 10.0kb downstream 13537 true Chr13: 33412605-33426141 Glycine max
Glyma.13G221200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 33412605-33422604 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306688 5265 Fabidae View MSA
124071972 5270 Rosid View MSA
123743168 5271 Pentapetalae View MSA
122791271 5272 Eudicot View MSA
122050644 5273 Angiosperm View MSA
121312043 5274 Embryophyte View MSA
123349254 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.036258 0.0 0.147924 Low  
cufflinks 0.283802 0.0 1.06283   High
cufflinks 0.215286 0.0 0.816541    
cufflinks 0.0319174 0.0 0.131155 Low  
cufflinks 0.052176 0.0 0.209458 Low  
cufflinks 0.341749 0.0 1.27101   High
cufflinks 0.0272987 0.0 0.11305 Low  
cufflinks 0.00932021 0.0 0.0421552 Low Low
cufflinks 0.018     Low  
cufflinks 0.011     Low  
cufflinks 0.088     Low High
cufflinks 0.054     Low  
cufflinks 0.009     Low  
cufflinks 0.016     Low  
cufflinks 0.055     Low  
cufflinks 0.005     Low Low
cufflinks 0.568       High
cufflinks 0.009     Low  
cufflinks 0.076     Low  
cufflinks 0.006     Low Low
cufflinks 0.017     Low  
cufflinks 0.028     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.015     Low  

0 Strain