Gene : Glyma.13G221400 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31384:SF3 - AUXIN RESPONSE FACTOR 6 Genomic Order:  2214
Name:  ? Glyma.13G221400 Secondary Identifier:  ? PAC:30504916
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G221400 0.5kb upstream 0.5kb upstream 7555 true Chr13: 33457302-33464856 Glycine max
Glyma.13G221400 0.5kb upstream 0.5kb upstream 500 false Chr13: 33457302-33457801 Glycine max
Glyma.13G221400 0.5kb downstream 0.5kb downstream 7555 true Chr13: 33457802-33465356 Glycine max
Glyma.13G221400 0.5kb downstream 0.5kb downstream 500 false Chr13: 33464857-33465356 Glycine max
Glyma.13G221400 1.0kb upstream 1.0kb upstream 8055 true Chr13: 33456802-33464856 Glycine max
Glyma.13G221400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 33456802-33457801 Glycine max
Glyma.13G221400 1.0kb downstream 1.0kb downstream 8055 true Chr13: 33457802-33465856 Glycine max
Glyma.13G221400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 33464857-33465856 Glycine max
Glyma.13G221400 2.0kb upstream 2.0kb upstream 9055 true Chr13: 33455802-33464856 Glycine max
Glyma.13G221400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 33455802-33457801 Glycine max
Glyma.13G221400 2.0kb downstream 2.0kb downstream 9055 true Chr13: 33457802-33466856 Glycine max
Glyma.13G221400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 33464857-33466856 Glycine max
Glyma.13G221400 5.0kb upstream 5.0kb upstream 12055 true Chr13: 33452802-33464856 Glycine max
Glyma.13G221400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 33452802-33457801 Glycine max
Glyma.13G221400 5.0kb downstream 5.0kb downstream 12055 true Chr13: 33457802-33469856 Glycine max
Glyma.13G221400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 33464857-33469856 Glycine max
Glyma.13G221400 10.0kb upstream 10.0kb upstream 17055 true Chr13: 33447802-33464856 Glycine max
Glyma.13G221400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 33447802-33457801 Glycine max
Glyma.13G221400 10.0kb downstream 10.0kb downstream 17055 true Chr13: 33457802-33474856 Glycine max
Glyma.13G221400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 33464857-33474856 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302206 5265 Fabidae View MSA
124073389 5270 Rosid View MSA
123749111 5271 Pentapetalae View MSA
122793528 5272 Eudicot View MSA
122048595 5273 Angiosperm View MSA
121351367 5274 Embryophyte View MSA
123382140 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.9463 0.0 45.5405    
cufflinks 42.8023 0.0 177.033 High High
cufflinks 16.835 0.0 61.7952    
cufflinks 17.2286 0.0 63.3602    
cufflinks 9.55623 0.0 32.7916    
cufflinks 3.13529 0.0 10.2579   Low
cufflinks 1.90501 0.0 8.3679   Low
cufflinks 29.2472 0.0 106.433 High High
cufflinks 2.99415 0.0 11.4024   Low
cufflinks 9.57     High  
cufflinks 0.139       Low
cufflinks 8.734     High  
cufflinks 0.757        
cufflinks 0.869        
cufflinks 0.101       Low
cufflinks 10.767     High  
cufflinks 2.078        
cufflinks 13.219     High  
cufflinks 15.332     High High
cufflinks 8.565     High  
cufflinks 0.565        
cufflinks 10.798     High  
cufflinks 7.204        
cufflinks 0.297       Low
cufflinks 8.496     High  
cufflinks 0.792        

0 Strain