Gene : Glyma.13G222000 G. max Wm82.a2.v1

Defline:  (1 of 2) PTHR24221:SF204 - ABC TRANSPORTER B FAMILY MEMBER 7-RELATED Genomic Order:  2220
Name:  ? Glyma.13G222000 Secondary Identifier:  ? PAC:30505726

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G222000 0.5kb upstream 0.5kb upstream 6178 true Chr13: 33493674-33499851 Glycine max
Glyma.13G222000 0.5kb upstream 0.5kb upstream 500 false Chr13: 33499352-33499851 Glycine max
Glyma.13G222000 0.5kb downstream 0.5kb downstream 6178 true Chr13: 33493174-33499351 Glycine max
Glyma.13G222000 0.5kb downstream 0.5kb downstream 500 false Chr13: 33493174-33493673 Glycine max
Glyma.13G222000 1.0kb upstream 1.0kb upstream 6678 true Chr13: 33493674-33500351 Glycine max
Glyma.13G222000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 33499352-33500351 Glycine max
Glyma.13G222000 1.0kb downstream 1.0kb downstream 6678 true Chr13: 33492674-33499351 Glycine max
Glyma.13G222000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 33492674-33493673 Glycine max
Glyma.13G222000 2.0kb upstream 2.0kb upstream 7678 true Chr13: 33493674-33501351 Glycine max
Glyma.13G222000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 33499352-33501351 Glycine max
Glyma.13G222000 2.0kb downstream 2.0kb downstream 7678 true Chr13: 33491674-33499351 Glycine max
Glyma.13G222000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 33491674-33493673 Glycine max
Glyma.13G222000 5.0kb upstream 5.0kb upstream 10678 true Chr13: 33493674-33504351 Glycine max
Glyma.13G222000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 33499352-33504351 Glycine max
Glyma.13G222000 5.0kb downstream 5.0kb downstream 10678 true Chr13: 33488674-33499351 Glycine max
Glyma.13G222000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 33488674-33493673 Glycine max
Glyma.13G222000 10.0kb upstream 10.0kb upstream 15678 true Chr13: 33493674-33509351 Glycine max
Glyma.13G222000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 33499352-33509351 Glycine max
Glyma.13G222000 10.0kb downstream 10.0kb downstream 15678 true Chr13: 33483674-33499351 Glycine max
Glyma.13G222000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 33483674-33493673 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315160 5265 Fabidae View MSA
124068480 5270 Rosid View MSA
123741431 5271 Pentapetalae View MSA
122789359 5272 Eudicot View MSA
122049071 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121350158 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0251743 0.0 0.101896 Low  
cufflinks 0.00486497 0.0 0.0236595 Low Low
cufflinks 23.6168 0.0 83.2919 High High
cufflinks 0.00538188 0.0 0.026124 Low Low
cufflinks 0.0912806 0.0 0.466081 Low  
cufflinks 0.412915 0.0 1.79288    
cufflinks 0.0133391 0.0 0.0570051 Low  
cufflinks 0.0688441 0.0 0.631872 Low  
cufflinks 0.186389 0.0 1.374 Low  
cufflinks 0.003     Low Low
cufflinks 0.075        
cufflinks 2.216       High
cufflinks 0.018     Low  
cufflinks 0.004     Low Low
cufflinks 0.042     Low  
cufflinks 0.162        
cufflinks 0.067     Low  
cufflinks 0.653       High
cufflinks 0.01     Low Low
cufflinks 0.251        
cufflinks 0.072        
cufflinks 0.23        
cufflinks 0.265        
cufflinks 0.058     Low  
cufflinks 0.129        
cufflinks 0.239        

0 Strain