Gene : Glyma.13G222500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR22880:SF153 - TRANSCRIPTION FACTOR GTE11-RELATED Genomic Order:  2225
Name:  ? Glyma.13G222500 Secondary Identifier:  ? PAC:30504933
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G222500 0.5kb upstream 0.5kb upstream 5248 true Chr13: 33531556-33536803 Glycine max
Glyma.13G222500 0.5kb upstream 0.5kb upstream 500 false Chr13: 33536304-33536803 Glycine max
Glyma.13G222500 0.5kb downstream 0.5kb downstream 5248 true Chr13: 33531056-33536303 Glycine max
Glyma.13G222500 0.5kb downstream 0.5kb downstream 500 false Chr13: 33531056-33531555 Glycine max
Glyma.13G222500 1.0kb upstream 1.0kb upstream 5748 true Chr13: 33531556-33537303 Glycine max
Glyma.13G222500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 33536304-33537303 Glycine max
Glyma.13G222500 1.0kb downstream 1.0kb downstream 5748 true Chr13: 33530556-33536303 Glycine max
Glyma.13G222500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 33530556-33531555 Glycine max
Glyma.13G222500 2.0kb upstream 2.0kb upstream 6748 true Chr13: 33531556-33538303 Glycine max
Glyma.13G222500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 33536304-33538303 Glycine max
Glyma.13G222500 2.0kb downstream 2.0kb downstream 6748 true Chr13: 33529556-33536303 Glycine max
Glyma.13G222500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 33529556-33531555 Glycine max
Glyma.13G222500 5.0kb upstream 5.0kb upstream 9748 true Chr13: 33531556-33541303 Glycine max
Glyma.13G222500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 33536304-33541303 Glycine max
Glyma.13G222500 5.0kb downstream 5.0kb downstream 9748 true Chr13: 33526556-33536303 Glycine max
Glyma.13G222500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 33526556-33531555 Glycine max
Glyma.13G222500 10.0kb upstream 10.0kb upstream 14748 true Chr13: 33531556-33546303 Glycine max
Glyma.13G222500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 33536304-33546303 Glycine max
Glyma.13G222500 10.0kb downstream 10.0kb downstream 14748 true Chr13: 33521556-33536303 Glycine max
Glyma.13G222500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 33521556-33531555 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300876 5265 Fabidae View MSA
124060921 5270 Rosid View MSA
123751846 5271 Pentapetalae View MSA
122796315 5272 Eudicot View MSA
122048835 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121311132 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.3585 0.0 63.3925   High
cufflinks 16.1697 0.0 48.2597    
cufflinks 19.1251 0.0 59.5497    
cufflinks 19.3009 0.0 59.8715    
cufflinks 11.6928 0.0 36.424    
cufflinks 8.14956 0.0 28.4119   Low
cufflinks 13.1812 0.0 39.7986    
cufflinks 13.9666 0.0 41.4705    
cufflinks 16.5218 0.0 50.0054    
cufflinks 4.551        
cufflinks 4.433        
cufflinks 6.773        
cufflinks 3.534       Low
cufflinks 3.925       Low
cufflinks 5.831     High  
cufflinks 6.707        
cufflinks 6.391     High  
cufflinks 6.83        
cufflinks 5.301        
cufflinks 7.525     High High
cufflinks 4.261        
cufflinks 6.877        
cufflinks 6.262        
cufflinks 3.416       Low
cufflinks 6.625        
cufflinks 4.049       Low

0 Strain