Gene : Glyma.13G223300 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11945:SF187 - FLORAL HOMEOTIC PROTEIN AGAMOUS Genomic Order:  2233
Name:  ? Glyma.13G223300 Secondary Identifier:  ? PAC:30502487
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G223300 0.5kb upstream 0.5kb upstream 10150 true Chr13: 33610531-33620680 Glycine max
Glyma.13G223300 0.5kb upstream 0.5kb upstream 500 false Chr13: 33620181-33620680 Glycine max
Glyma.13G223300 0.5kb downstream 0.5kb downstream 10150 true Chr13: 33610031-33620180 Glycine max
Glyma.13G223300 0.5kb downstream 0.5kb downstream 500 false Chr13: 33610031-33610530 Glycine max
Glyma.13G223300 1.0kb upstream 1.0kb upstream 10650 true Chr13: 33610531-33621180 Glycine max
Glyma.13G223300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 33620181-33621180 Glycine max
Glyma.13G223300 1.0kb downstream 1.0kb downstream 10650 true Chr13: 33609531-33620180 Glycine max
Glyma.13G223300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 33609531-33610530 Glycine max
Glyma.13G223300 2.0kb upstream 2.0kb upstream 11650 true Chr13: 33610531-33622180 Glycine max
Glyma.13G223300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 33620181-33622180 Glycine max
Glyma.13G223300 2.0kb downstream 2.0kb downstream 11650 true Chr13: 33608531-33620180 Glycine max
Glyma.13G223300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 33608531-33610530 Glycine max
Glyma.13G223300 5.0kb upstream 5.0kb upstream 14650 true Chr13: 33610531-33625180 Glycine max
Glyma.13G223300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 33620181-33625180 Glycine max
Glyma.13G223300 5.0kb downstream 5.0kb downstream 14650 true Chr13: 33605531-33620180 Glycine max
Glyma.13G223300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 33605531-33610530 Glycine max
Glyma.13G223300 10.0kb upstream 10.0kb upstream 19650 true Chr13: 33610531-33630180 Glycine max
Glyma.13G223300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 33620181-33630180 Glycine max
Glyma.13G223300 10.0kb downstream 10.0kb downstream 19650 true Chr13: 33600531-33620180 Glycine max
Glyma.13G223300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 33600531-33610530 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311895 5265 Fabidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.320216 0.0 1.62011    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 39.1393 0.0 138.179 High  
cufflinks 79.0065 0.0 321.276 High High
cufflinks 0.0161509 0.0 0.0865485 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 21.4361 0.0 74.6675    
cufflinks 0.172886 0.0 0.680408 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low  
cufflinks 2.627       High
cufflinks 0.002     Low  
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.003     Low  
cufflinks 6.571       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.003     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain