Gene : Glyma.13G225200 G. max Wm82.a2.v1
Genomic Order:  2252 Name:  ? Glyma.13G225200
Secondary Identifier:  ? PAC:30501609
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G225200 0.5kb upstream 0.5kb upstream 1540 true Chr13: 33803981-33805520 Glycine max
Glyma.13G225200 0.5kb upstream 0.5kb upstream 500 false Chr13: 33805021-33805520 Glycine max
Glyma.13G225200 0.5kb downstream 0.5kb downstream 1540 true Chr13: 33803481-33805020 Glycine max
Glyma.13G225200 0.5kb downstream 0.5kb downstream 500 false Chr13: 33803481-33803980 Glycine max
Glyma.13G225200 1.0kb upstream 1.0kb upstream 2040 true Chr13: 33803981-33806020 Glycine max
Glyma.13G225200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 33805021-33806020 Glycine max
Glyma.13G225200 1.0kb downstream 1.0kb downstream 2040 true Chr13: 33802981-33805020 Glycine max
Glyma.13G225200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 33802981-33803980 Glycine max
Glyma.13G225200 2.0kb upstream 2.0kb upstream 3040 true Chr13: 33803981-33807020 Glycine max
Glyma.13G225200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 33805021-33807020 Glycine max
Glyma.13G225200 2.0kb downstream 2.0kb downstream 3040 true Chr13: 33801981-33805020 Glycine max
Glyma.13G225200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 33801981-33803980 Glycine max
Glyma.13G225200 5.0kb upstream 5.0kb upstream 6040 true Chr13: 33803981-33810020 Glycine max
Glyma.13G225200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 33805021-33810020 Glycine max
Glyma.13G225200 5.0kb downstream 5.0kb downstream 6040 true Chr13: 33798981-33805020 Glycine max
Glyma.13G225200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 33798981-33803980 Glycine max
Glyma.13G225200 10.0kb upstream 10.0kb upstream 11040 true Chr13: 33803981-33815020 Glycine max
Glyma.13G225200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 33805021-33815020 Glycine max
Glyma.13G225200 10.0kb downstream 10.0kb downstream 11040 true Chr13: 33793981-33805020 Glycine max
Glyma.13G225200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 33793981-33803980 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122240801 5265 Fabidae Singleton cluster - no MSA
124073274 5270 Rosid View MSA
123746985 5271 Pentapetalae View MSA
122772073 5272 Eudicot View MSA
122048544 5273 Angiosperm View MSA
121311015 5274 Embryophyte View MSA
123348373 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.59725 0.0 7.25001   Low
cufflinks 5.83628 0.0 19.2038    
cufflinks 1.68728 0.0 7.45483   Low
cufflinks 3.76346 0.0 14.0076    
cufflinks 11.5091 0.0 40.2195    
cufflinks 17.5045 0.0 55.6622   High
cufflinks 3.67988 0.0 13.8317    
cufflinks 13.3177 0.0 44.849   High
cufflinks 5.89383 0.0 19.4156    
cufflinks 7.838     High High
cufflinks 1.055        
cufflinks 2.067        
cufflinks 9.91     High High
cufflinks 16.635     High High
cufflinks 0.337       Low
cufflinks 2.564        
cufflinks 2.523        
cufflinks 3.408        
cufflinks 4.977        
cufflinks 1.257        
cufflinks 1.334        
cufflinks 2.381        
cufflinks 3.807        
cufflinks 0.816       Low
cufflinks 1.841        
cufflinks 2.038        

0 Strain