Gene : Glyma.13G225400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15629//PTHR15629:SF9 - SH3YL1 PROTEIN Genomic Order:  2254
Name:  ? Glyma.13G225400 Secondary Identifier:  ? PAC:30503719
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G225400 0.5kb upstream 0.5kb upstream 4809 true Chr13: 33806292-33811100 Glycine max
Glyma.13G225400 0.5kb upstream 0.5kb upstream 500 false Chr13: 33806292-33806791 Glycine max
Glyma.13G225400 0.5kb downstream 0.5kb downstream 4809 true Chr13: 33806792-33811600 Glycine max
Glyma.13G225400 0.5kb downstream 0.5kb downstream 500 false Chr13: 33811101-33811600 Glycine max
Glyma.13G225400 1.0kb upstream 1.0kb upstream 5309 true Chr13: 33805792-33811100 Glycine max
Glyma.13G225400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 33805792-33806791 Glycine max
Glyma.13G225400 1.0kb downstream 1.0kb downstream 5309 true Chr13: 33806792-33812100 Glycine max
Glyma.13G225400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 33811101-33812100 Glycine max
Glyma.13G225400 2.0kb upstream 2.0kb upstream 6309 true Chr13: 33804792-33811100 Glycine max
Glyma.13G225400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 33804792-33806791 Glycine max
Glyma.13G225400 2.0kb downstream 2.0kb downstream 6309 true Chr13: 33806792-33813100 Glycine max
Glyma.13G225400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 33811101-33813100 Glycine max
Glyma.13G225400 5.0kb upstream 5.0kb upstream 9309 true Chr13: 33801792-33811100 Glycine max
Glyma.13G225400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 33801792-33806791 Glycine max
Glyma.13G225400 5.0kb downstream 5.0kb downstream 9309 true Chr13: 33806792-33816100 Glycine max
Glyma.13G225400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 33811101-33816100 Glycine max
Glyma.13G225400 10.0kb upstream 10.0kb upstream 14309 true Chr13: 33796792-33811100 Glycine max
Glyma.13G225400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 33796792-33806791 Glycine max
Glyma.13G225400 10.0kb downstream 10.0kb downstream 14309 true Chr13: 33806792-33821100 Glycine max
Glyma.13G225400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 33811101-33821100 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312037 5265 Fabidae View MSA
124073476 5270 Rosid View MSA
123736905 5271 Pentapetalae View MSA
122785686 5272 Eudicot View MSA
122047876 5273 Angiosperm View MSA
121349418 5274 Embryophyte View MSA
123426176 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.60221 0.0 18.2692    
cufflinks 5.44598 0.0 15.3506    
cufflinks 20.4539 0.0 54.852 High High
cufflinks 5.44933 0.0 15.3529    
cufflinks 5.103 0.0 14.5076    
cufflinks 20.141 0.0 53.9354   High
cufflinks 5.51494 0.0 15.5422    
cufflinks 7.74402 0.0 21.1628    
cufflinks 6.57192 0.0 18.1847    
cufflinks 2.336       Low
cufflinks 9.418     High High
cufflinks 6.323        
cufflinks 3.23        
cufflinks 2.265       Low
cufflinks 4.4        
cufflinks 3.98        
cufflinks 5.994        
cufflinks 3.114        
cufflinks 3.244        
cufflinks 4.209        
cufflinks 5.546        
cufflinks 3.974        
cufflinks 3.08        
cufflinks 9.777     High High
cufflinks 3.946        
cufflinks 7.722     High High

0 Strain