Gene : Glyma.13G213400 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31251:SF2 - SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 7 Genomic Order:  2134
Name:  ? Glyma.13G213400 Secondary Identifier:  ? PAC:30501125
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G213400 0.5kb upstream 0.5kb upstream 7601 true Chr13: 32690805-32698405 Glycine max
Glyma.13G213400 0.5kb upstream 0.5kb upstream 500 false Chr13: 32697906-32698405 Glycine max
Glyma.13G213400 0.5kb downstream 0.5kb downstream 7601 true Chr13: 32690305-32697905 Glycine max
Glyma.13G213400 0.5kb downstream 0.5kb downstream 500 false Chr13: 32690305-32690804 Glycine max
Glyma.13G213400 1.0kb upstream 1.0kb upstream 8101 true Chr13: 32690805-32698905 Glycine max
Glyma.13G213400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 32697906-32698905 Glycine max
Glyma.13G213400 1.0kb downstream 1.0kb downstream 8101 true Chr13: 32689805-32697905 Glycine max
Glyma.13G213400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 32689805-32690804 Glycine max
Glyma.13G213400 2.0kb upstream 2.0kb upstream 9101 true Chr13: 32690805-32699905 Glycine max
Glyma.13G213400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 32697906-32699905 Glycine max
Glyma.13G213400 2.0kb downstream 2.0kb downstream 9101 true Chr13: 32688805-32697905 Glycine max
Glyma.13G213400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 32688805-32690804 Glycine max
Glyma.13G213400 5.0kb upstream 5.0kb upstream 12101 true Chr13: 32690805-32702905 Glycine max
Glyma.13G213400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 32697906-32702905 Glycine max
Glyma.13G213400 5.0kb downstream 5.0kb downstream 12101 true Chr13: 32685805-32697905 Glycine max
Glyma.13G213400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 32685805-32690804 Glycine max
Glyma.13G213400 10.0kb upstream 10.0kb upstream 17101 true Chr13: 32690805-32707905 Glycine max
Glyma.13G213400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 32697906-32707905 Glycine max
Glyma.13G213400 10.0kb downstream 10.0kb downstream 17101 true Chr13: 32680805-32697905 Glycine max
Glyma.13G213400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 32680805-32690804 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299227 5265 Fabidae View MSA
124068393 5270 Rosid View MSA
123740263 5271 Pentapetalae View MSA
122769973 5272 Eudicot View MSA
122044100 5273 Angiosperm View MSA
121349688 5274 Embryophyte View MSA
123426856 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2645 0.0 55.9799    
cufflinks 8.32156 0.0 37.0957    
cufflinks 12.0122 0.0 50.8823    
cufflinks 16.7776 0.0 78.3294   High
cufflinks 8.8 0.0 38.52    
cufflinks 10.9369 0.0 45.0648    
cufflinks 5.75041 0.0 29.4945   Low
cufflinks 18.6433 0.0 80.8816   High
cufflinks 8.20826 0.0 36.321    
cufflinks 1.284        
cufflinks 0.799        
cufflinks 1.086        
cufflinks 0.995        
cufflinks 0.773        
cufflinks 0.56       Low
cufflinks 1.318        
cufflinks 0.704       Low
cufflinks 1.088        
cufflinks 1.197        
cufflinks 1.479       High
cufflinks 0.582       Low
cufflinks 1.499       High
cufflinks 1.126        
cufflinks 1.049        
cufflinks 1.312        
cufflinks 0.718       Low

0 Strain