Gene : Glyma.13G214800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR15117 - ATAXIN 7 RELATED Genomic Order:  2148
Name:  ? Glyma.13G214800 Secondary Identifier:  ? PAC:30500322
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G214800 0.5kb upstream 0.5kb upstream 7869 true Chr13: 32820976-32828844 Glycine max
Glyma.13G214800 0.5kb upstream 0.5kb upstream 500 false Chr13: 32820976-32821475 Glycine max
Glyma.13G214800 0.5kb downstream 0.5kb downstream 7869 true Chr13: 32821476-32829344 Glycine max
Glyma.13G214800 0.5kb downstream 0.5kb downstream 500 false Chr13: 32828845-32829344 Glycine max
Glyma.13G214800 1.0kb upstream 1.0kb upstream 8369 true Chr13: 32820476-32828844 Glycine max
Glyma.13G214800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 32820476-32821475 Glycine max
Glyma.13G214800 1.0kb downstream 1.0kb downstream 8369 true Chr13: 32821476-32829844 Glycine max
Glyma.13G214800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 32828845-32829844 Glycine max
Glyma.13G214800 2.0kb upstream 2.0kb upstream 9369 true Chr13: 32819476-32828844 Glycine max
Glyma.13G214800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 32819476-32821475 Glycine max
Glyma.13G214800 2.0kb downstream 2.0kb downstream 9369 true Chr13: 32821476-32830844 Glycine max
Glyma.13G214800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 32828845-32830844 Glycine max
Glyma.13G214800 5.0kb upstream 5.0kb upstream 12369 true Chr13: 32816476-32828844 Glycine max
Glyma.13G214800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 32816476-32821475 Glycine max
Glyma.13G214800 5.0kb downstream 5.0kb downstream 12369 true Chr13: 32821476-32833844 Glycine max
Glyma.13G214800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 32828845-32833844 Glycine max
Glyma.13G214800 10.0kb upstream 10.0kb upstream 17369 true Chr13: 32811476-32828844 Glycine max
Glyma.13G214800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 32811476-32821475 Glycine max
Glyma.13G214800 10.0kb downstream 10.0kb downstream 17369 true Chr13: 32821476-32838844 Glycine max
Glyma.13G214800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 32828845-32838844 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305250 5265 Fabidae View MSA
124070054 5270 Rosid View MSA
123742737 5271 Pentapetalae View MSA
122795135 5272 Eudicot View MSA
122048179 5273 Angiosperm View MSA
121348263 5274 Embryophyte View MSA
123380797 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.65154 0.0 8.8102    
cufflinks 2.89212 0.0 12.9534   High
cufflinks 1.82638 0.0 9.95013    
cufflinks 2.87484 0.0 12.2596   High
cufflinks 1.19022 0.0 7.84414   Low
cufflinks 0.923512 0.0 5.4882   Low
cufflinks 2.55665 0.0 12.0005    
cufflinks 1.98397 0.0 9.14238    
cufflinks 1.97848 0.0 11.7943    
cufflinks 0.227        
cufflinks 0.036     Low Low
cufflinks 0.301        
cufflinks 0.152        
cufflinks 0.213        
cufflinks 0.137        
cufflinks 0.383        
cufflinks 0.055     Low Low
cufflinks 0.437        
cufflinks 0.584       High
cufflinks 0.352        
cufflinks 0.039     Low Low
cufflinks 0.395        
cufflinks 0.52       High
cufflinks 0.055     Low Low
cufflinks 0.382        
cufflinks 0.055     Low Low

0 Strain