Gene : Glyma.13G215500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11615//PTHR11615:SF113 - NITRATE, FROMATE, IRON DEHYDROGENASE Genomic Order:  2155
Name:  ? Glyma.13G215500 Secondary Identifier:  ? PAC:30502492
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G215500 0.5kb upstream 0.5kb upstream 13918 true Chr13: 32877770-32891687 Glycine max
Glyma.13G215500 0.5kb upstream 0.5kb upstream 500 false Chr13: 32891188-32891687 Glycine max
Glyma.13G215500 0.5kb downstream 0.5kb downstream 13918 true Chr13: 32877270-32891187 Glycine max
Glyma.13G215500 0.5kb downstream 0.5kb downstream 500 false Chr13: 32877270-32877769 Glycine max
Glyma.13G215500 1.0kb upstream 1.0kb upstream 14418 true Chr13: 32877770-32892187 Glycine max
Glyma.13G215500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 32891188-32892187 Glycine max
Glyma.13G215500 1.0kb downstream 1.0kb downstream 14418 true Chr13: 32876770-32891187 Glycine max
Glyma.13G215500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 32876770-32877769 Glycine max
Glyma.13G215500 2.0kb upstream 2.0kb upstream 15418 true Chr13: 32877770-32893187 Glycine max
Glyma.13G215500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 32891188-32893187 Glycine max
Glyma.13G215500 2.0kb downstream 2.0kb downstream 15418 true Chr13: 32875770-32891187 Glycine max
Glyma.13G215500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 32875770-32877769 Glycine max
Glyma.13G215500 5.0kb upstream 5.0kb upstream 18418 true Chr13: 32877770-32896187 Glycine max
Glyma.13G215500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 32891188-32896187 Glycine max
Glyma.13G215500 5.0kb downstream 5.0kb downstream 18418 true Chr13: 32872770-32891187 Glycine max
Glyma.13G215500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 32872770-32877769 Glycine max
Glyma.13G215500 10.0kb upstream 10.0kb upstream 23418 true Chr13: 32877770-32901187 Glycine max
Glyma.13G215500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 32891188-32901187 Glycine max
Glyma.13G215500 10.0kb downstream 10.0kb downstream 23418 true Chr13: 32867770-32891187 Glycine max
Glyma.13G215500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 32867770-32877769 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309653 5265 Fabidae View MSA
124061198 5270 Rosid View MSA
123745994 5271 Pentapetalae View MSA
122793271 5272 Eudicot View MSA
122045683 5273 Angiosperm View MSA
121351638 5274 Embryophyte View MSA
123382256 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.51968 0.0 4.6251    
cufflinks 2.07015 0.0 6.03376    
cufflinks 1.13337 0.0 3.57971    
cufflinks 1.18775 0.0 3.73784    
cufflinks 1.21315 0.0 3.8175    
cufflinks 0.258955 0.0 0.947986 Low Low
cufflinks 1.80033 0.0 5.36471    
cufflinks 5.11609 0.0 13.7697   High
cufflinks 1.99897 0.0 5.85011    
cufflinks 0.717        
cufflinks 0.322        
cufflinks 0.283        
cufflinks 0.049     Low Low
cufflinks 0.153        
cufflinks 0.078       Low
cufflinks 0.956        
cufflinks 0.561        
cufflinks 0.589        
cufflinks 0.875        
cufflinks 1.385       High
cufflinks 0.299        
cufflinks 1.246       High
cufflinks 1.146        
cufflinks 0.193        
cufflinks 1.242       High
cufflinks 0.085       Low

0 Strain