Gene : Glyma.13G216800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11702:SF20 - GTP-BINDING PROTEIN OBGC, CHLOROPLASTIC Genomic Order:  2168
Name:  ? Glyma.13G216800 Secondary Identifier:  ? PAC:30505405
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G216800 0.5kb upstream 0.5kb upstream 5157 true Chr13: 32980947-32986103 Glycine max
Glyma.13G216800 0.5kb upstream 0.5kb upstream 500 false Chr13: 32980947-32981446 Glycine max
Glyma.13G216800 0.5kb downstream 0.5kb downstream 5157 true Chr13: 32981447-32986603 Glycine max
Glyma.13G216800 0.5kb downstream 0.5kb downstream 500 false Chr13: 32986104-32986603 Glycine max
Glyma.13G216800 1.0kb upstream 1.0kb upstream 5657 true Chr13: 32980447-32986103 Glycine max
Glyma.13G216800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 32980447-32981446 Glycine max
Glyma.13G216800 1.0kb downstream 1.0kb downstream 5657 true Chr13: 32981447-32987103 Glycine max
Glyma.13G216800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 32986104-32987103 Glycine max
Glyma.13G216800 2.0kb upstream 2.0kb upstream 6657 true Chr13: 32979447-32986103 Glycine max
Glyma.13G216800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 32979447-32981446 Glycine max
Glyma.13G216800 2.0kb downstream 2.0kb downstream 6657 true Chr13: 32981447-32988103 Glycine max
Glyma.13G216800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 32986104-32988103 Glycine max
Glyma.13G216800 5.0kb upstream 5.0kb upstream 9657 true Chr13: 32976447-32986103 Glycine max
Glyma.13G216800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 32976447-32981446 Glycine max
Glyma.13G216800 5.0kb downstream 5.0kb downstream 9657 true Chr13: 32981447-32991103 Glycine max
Glyma.13G216800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 32986104-32991103 Glycine max
Glyma.13G216800 10.0kb upstream 10.0kb upstream 14657 true Chr13: 32971447-32986103 Glycine max
Glyma.13G216800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 32971447-32981446 Glycine max
Glyma.13G216800 10.0kb downstream 10.0kb downstream 14657 true Chr13: 32981447-32996103 Glycine max
Glyma.13G216800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 32986104-32996103 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041071 5273 Angiosperm View MSA
122303867 5265 Fabidae View MSA
124062499 5270 Rosid View MSA
123739665 5271 Pentapetalae View MSA
122793688 5272 Eudicot View MSA
121346272 5274 Embryophyte View MSA
123428506 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.9599 0.0 76.9267   High
cufflinks 9.14994 0.0 31.2902    
cufflinks 9.66452 0.0 32.9481    
cufflinks 8.80923 0.0 30.2126    
cufflinks 4.09566 0.0 15.8911    
cufflinks 2.43186 0.0 7.51409   Low
cufflinks 3.95395 0.0 13.3047    
cufflinks 5.67896 0.0 20.7221    
cufflinks 3.37904 0.0 11.9179    
cufflinks 2.223        
cufflinks 1.323        
cufflinks 3.618        
cufflinks 0.672       Low
cufflinks 0.552       Low
cufflinks 1.828        
cufflinks 6.276       High
cufflinks 1.979        
cufflinks 3.085        
cufflinks 4.041        
cufflinks 6.727       High
cufflinks 1.147        
cufflinks 6.061       High
cufflinks 8.208     High High
cufflinks 1.69        
cufflinks 6.307       High
cufflinks 1.717        

0 Strain