Gene : Glyma.13G217500 G. max Wm82.a2.v1
Defline:  (1 of 2) 2.7.8.13 - Phospho-N-acetylmuramoyl-pentapeptide-transferase / UDP-MurNAc-pentapeptide phosphotransferase Genomic Order:  2175
Name:  ? Glyma.13G217500 Secondary Identifier:  ? PAC:30502407
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G217500 0.5kb upstream 0.5kb upstream 7630 true Chr13: 33046237-33053866 Glycine max
Glyma.13G217500 0.5kb upstream 0.5kb upstream 500 false Chr13: 33053367-33053866 Glycine max
Glyma.13G217500 0.5kb downstream 0.5kb downstream 7630 true Chr13: 33045737-33053366 Glycine max
Glyma.13G217500 0.5kb downstream 0.5kb downstream 500 false Chr13: 33045737-33046236 Glycine max
Glyma.13G217500 1.0kb upstream 1.0kb upstream 8130 true Chr13: 33046237-33054366 Glycine max
Glyma.13G217500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 33053367-33054366 Glycine max
Glyma.13G217500 1.0kb downstream 1.0kb downstream 8130 true Chr13: 33045237-33053366 Glycine max
Glyma.13G217500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 33045237-33046236 Glycine max
Glyma.13G217500 2.0kb upstream 2.0kb upstream 9130 true Chr13: 33046237-33055366 Glycine max
Glyma.13G217500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 33053367-33055366 Glycine max
Glyma.13G217500 2.0kb downstream 2.0kb downstream 9130 true Chr13: 33044237-33053366 Glycine max
Glyma.13G217500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 33044237-33046236 Glycine max
Glyma.13G217500 5.0kb upstream 5.0kb upstream 12130 true Chr13: 33046237-33058366 Glycine max
Glyma.13G217500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 33053367-33058366 Glycine max
Glyma.13G217500 5.0kb downstream 5.0kb downstream 12130 true Chr13: 33041237-33053366 Glycine max
Glyma.13G217500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 33041237-33046236 Glycine max
Glyma.13G217500 10.0kb upstream 10.0kb upstream 17130 true Chr13: 33046237-33063366 Glycine max
Glyma.13G217500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 33053367-33063366 Glycine max
Glyma.13G217500 10.0kb downstream 10.0kb downstream 17130 true Chr13: 33036237-33053366 Glycine max
Glyma.13G217500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 33036237-33046236 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306756 5265 Fabidae View MSA
124069540 5270 Rosid View MSA
123739235 5271 Pentapetalae View MSA
122791139 5272 Eudicot View MSA
122047411 5273 Angiosperm View MSA
121346941 5274 Embryophyte View MSA
123428425 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.552727 0.0 5.15001   Low
cufflinks 1.38463 0.0 11.6479    
cufflinks 1.68069 0.0 12.5631    
cufflinks 1.50162 0.0 13.6317    
cufflinks 1.44722 0.0 11.0913    
cufflinks 0.689625 0.0 4.56411   Low
cufflinks 1.48784 0.0 12.1111    
cufflinks 1.56244 0.0 13.3823    
cufflinks 0.764072 0.0 6.59184    
cufflinks 0.081     Low  
cufflinks 0.019     Low  
cufflinks 0.097     Low  
cufflinks 0.118       High
cufflinks 0.219       High
cufflinks 0.004     Low Low
cufflinks 0.03     Low  
cufflinks 0.032     Low  
cufflinks 0.131       High
cufflinks 0.117       High
cufflinks 0.019     Low  
cufflinks 0.014     Low  
cufflinks 0.027     Low  
cufflinks 0.062     Low  
cufflinks 0.018     Low  
cufflinks 0.021     Low  
cufflinks 0.021     Low  

0 Strain