Gene : Glyma.13G218600 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11932:SF27 - CULLIN-4, ISOFORM A Genomic Order:  2186
Name:  ? Glyma.13G218600 Secondary Identifier:  ? PAC:30500112
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G218600 0.5kb upstream 0.5kb upstream 3438 true Chr13: 33200253-33203690 Glycine max
Glyma.13G218600 0.5kb upstream 0.5kb upstream 500 false Chr13: 33200253-33200752 Glycine max
Glyma.13G218600 0.5kb downstream 0.5kb downstream 3438 true Chr13: 33200753-33204190 Glycine max
Glyma.13G218600 0.5kb downstream 0.5kb downstream 500 false Chr13: 33203691-33204190 Glycine max
Glyma.13G218600 1.0kb upstream 1.0kb upstream 3938 true Chr13: 33199753-33203690 Glycine max
Glyma.13G218600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 33199753-33200752 Glycine max
Glyma.13G218600 1.0kb downstream 1.0kb downstream 3938 true Chr13: 33200753-33204690 Glycine max
Glyma.13G218600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 33203691-33204690 Glycine max
Glyma.13G218600 2.0kb upstream 2.0kb upstream 4938 true Chr13: 33198753-33203690 Glycine max
Glyma.13G218600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 33198753-33200752 Glycine max
Glyma.13G218600 2.0kb downstream 2.0kb downstream 4938 true Chr13: 33200753-33205690 Glycine max
Glyma.13G218600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 33203691-33205690 Glycine max
Glyma.13G218600 5.0kb upstream 5.0kb upstream 7938 true Chr13: 33195753-33203690 Glycine max
Glyma.13G218600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 33195753-33200752 Glycine max
Glyma.13G218600 5.0kb downstream 5.0kb downstream 7938 true Chr13: 33200753-33208690 Glycine max
Glyma.13G218600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 33203691-33208690 Glycine max
Glyma.13G218600 10.0kb upstream 10.0kb upstream 12938 true Chr13: 33190753-33203690 Glycine max
Glyma.13G218600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 33190753-33200752 Glycine max
Glyma.13G218600 10.0kb downstream 10.0kb downstream 12938 true Chr13: 33200753-33213690 Glycine max
Glyma.13G218600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 33203691-33213690 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027126 5273 Angiosperm View MSA
122298115 5265 Fabidae View MSA
124050605 5270 Rosid View MSA
123742728 5271 Pentapetalae View MSA
122770370 5272 Eudicot View MSA
121296825 5274 Embryophyte View MSA
123334939 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.5779 0.0 42.3418    
cufflinks 14.3589 0.0 39.1838    
cufflinks 23.557 0.0 62.905 High High
cufflinks 18.6571 0.0 50.1727    
cufflinks 16.0939 0.0 43.6938    
cufflinks 12.1779 0.0 33.7206   Low
cufflinks 21.1397 0.0 56.696   High
cufflinks 16.8796 0.0 45.6101    
cufflinks 18.769 0.0 50.5023    
cufflinks 5.476        
cufflinks 4.106       Low
cufflinks 8.094     High High
cufflinks 6.566        
cufflinks 6.284        
cufflinks 4.627        
cufflinks 5.485        
cufflinks 3.692       Low
cufflinks 8.906     High High
cufflinks 6.575        
cufflinks 6.524        
cufflinks 4.646        
cufflinks 5.89        
cufflinks 5.691        
cufflinks 4.663        
cufflinks 5.824        
cufflinks 4.918        

0 Strain