Gene : Glyma.13G220100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24351:SF60 - PROTEIN KINASE PINOID Genomic Order:  2201
Name:  ? Glyma.13G220100 Secondary Identifier:  ? PAC:30500336
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G220100 0.5kb upstream 0.5kb upstream 3286 true Chr13: 33350396-33353681 Glycine max
Glyma.13G220100 0.5kb upstream 0.5kb upstream 500 false Chr13: 33350396-33350895 Glycine max
Glyma.13G220100 0.5kb downstream 0.5kb downstream 3286 true Chr13: 33350896-33354181 Glycine max
Glyma.13G220100 0.5kb downstream 0.5kb downstream 500 false Chr13: 33353682-33354181 Glycine max
Glyma.13G220100 1.0kb upstream 1.0kb upstream 3786 true Chr13: 33349896-33353681 Glycine max
Glyma.13G220100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 33349896-33350895 Glycine max
Glyma.13G220100 1.0kb downstream 1.0kb downstream 3786 true Chr13: 33350896-33354681 Glycine max
Glyma.13G220100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 33353682-33354681 Glycine max
Glyma.13G220100 2.0kb upstream 2.0kb upstream 4786 true Chr13: 33348896-33353681 Glycine max
Glyma.13G220100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 33348896-33350895 Glycine max
Glyma.13G220100 2.0kb downstream 2.0kb downstream 4786 true Chr13: 33350896-33355681 Glycine max
Glyma.13G220100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 33353682-33355681 Glycine max
Glyma.13G220100 5.0kb upstream 5.0kb upstream 7786 true Chr13: 33345896-33353681 Glycine max
Glyma.13G220100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 33345896-33350895 Glycine max
Glyma.13G220100 5.0kb downstream 5.0kb downstream 7786 true Chr13: 33350896-33358681 Glycine max
Glyma.13G220100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 33353682-33358681 Glycine max
Glyma.13G220100 10.0kb upstream 10.0kb upstream 12786 true Chr13: 33340896-33353681 Glycine max
Glyma.13G220100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 33340896-33350895 Glycine max
Glyma.13G220100 10.0kb downstream 10.0kb downstream 12786 true Chr13: 33350896-33363681 Glycine max
Glyma.13G220100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 33353682-33363681 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311643 5265 Fabidae View MSA
124067652 5270 Rosid View MSA
123738624 5271 Pentapetalae View MSA
122769929 5272 Eudicot View MSA
122046233 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121310576 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.417514 0.0 1.55909   Low
cufflinks 8.62427 0.0 23.7995   High
cufflinks 4.02251 0.0 12.2766    
cufflinks 3.73227 0.0 11.3737    
cufflinks 1.36084 0.0 4.66863    
cufflinks 0.657038 0.0 2.39496    
cufflinks 2.84795 0.0 8.93137    
cufflinks 8.46675 0.0 23.3678   High
cufflinks 0.303882 0.0 1.15135   Low
cufflinks 3.279        
cufflinks 0.556        
cufflinks 3.776        
cufflinks 0.314       Low
cufflinks 0.367        
cufflinks 0.032     Low Low
cufflinks 3.618        
cufflinks 4.967       High
cufflinks 4.717       High
cufflinks 4.008        
cufflinks 1.507        
cufflinks 1.257        
cufflinks 1.603        
cufflinks 1.19        
cufflinks 0.254       Low
cufflinks 1.966        
cufflinks 1.835        

0 Strain