Gene : Glyma.13G207700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10252:SF8 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT GAMMA Genomic Order:  2077
Name:  ? Glyma.13G207700 Secondary Identifier:  ? PAC:30503981
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G207700 0.5kb upstream 0.5kb upstream 3727 true Chr13: 32124827-32128553 Glycine max
Glyma.13G207700 0.5kb upstream 0.5kb upstream 500 false Chr13: 32128054-32128553 Glycine max
Glyma.13G207700 0.5kb downstream 0.5kb downstream 3727 true Chr13: 32124327-32128053 Glycine max
Glyma.13G207700 0.5kb downstream 0.5kb downstream 500 false Chr13: 32124327-32124826 Glycine max
Glyma.13G207700 1.0kb upstream 1.0kb upstream 4227 true Chr13: 32124827-32129053 Glycine max
Glyma.13G207700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 32128054-32129053 Glycine max
Glyma.13G207700 1.0kb downstream 1.0kb downstream 4227 true Chr13: 32123827-32128053 Glycine max
Glyma.13G207700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 32123827-32124826 Glycine max
Glyma.13G207700 2.0kb upstream 2.0kb upstream 5227 true Chr13: 32124827-32130053 Glycine max
Glyma.13G207700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 32128054-32130053 Glycine max
Glyma.13G207700 2.0kb downstream 2.0kb downstream 5227 true Chr13: 32122827-32128053 Glycine max
Glyma.13G207700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 32122827-32124826 Glycine max
Glyma.13G207700 5.0kb upstream 5.0kb upstream 8227 true Chr13: 32124827-32133053 Glycine max
Glyma.13G207700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 32128054-32133053 Glycine max
Glyma.13G207700 5.0kb downstream 5.0kb downstream 8227 true Chr13: 32119827-32128053 Glycine max
Glyma.13G207700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 32119827-32124826 Glycine max
Glyma.13G207700 10.0kb upstream 10.0kb upstream 13227 true Chr13: 32124827-32138053 Glycine max
Glyma.13G207700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 32128054-32138053 Glycine max
Glyma.13G207700 10.0kb downstream 10.0kb downstream 13227 true Chr13: 32114827-32128053 Glycine max
Glyma.13G207700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 32114827-32124826 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122245895 5265 Fabidae Singleton cluster - no MSA
123989944 5270 Rosid Singleton cluster - no MSA
123565000 5271 Pentapetalae Singleton cluster - no MSA
122599769 5272 Eudicot Singleton cluster - no MSA
122051917 5273 Angiosperm View MSA
123429029 5275 Viridiplantae View MSA
121312797 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0301755 0.0 0.133566 Low  
cufflinks 0.50636 0.0 1.92874   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0456435 0.0 0.195606 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.064     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.006     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain