Gene : Glyma.13G208800 G. max Wm82.a2.v1
Defline:  (1 of 21) PF09335 - SNARE associated Golgi protein (SNARE_assoc) Genomic Order:  2088
Name:  ? Glyma.13G208800 Secondary Identifier:  ? PAC:30504056
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G208800 0.5kb upstream 0.5kb upstream 7668 true Chr13: 32271213-32278880 Glycine max
Glyma.13G208800 0.5kb upstream 0.5kb upstream 500 false Chr13: 32278381-32278880 Glycine max
Glyma.13G208800 0.5kb downstream 0.5kb downstream 7668 true Chr13: 32270713-32278380 Glycine max
Glyma.13G208800 0.5kb downstream 0.5kb downstream 500 false Chr13: 32270713-32271212 Glycine max
Glyma.13G208800 1.0kb upstream 1.0kb upstream 8168 true Chr13: 32271213-32279380 Glycine max
Glyma.13G208800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 32278381-32279380 Glycine max
Glyma.13G208800 1.0kb downstream 1.0kb downstream 8168 true Chr13: 32270213-32278380 Glycine max
Glyma.13G208800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 32270213-32271212 Glycine max
Glyma.13G208800 2.0kb upstream 2.0kb upstream 9168 true Chr13: 32271213-32280380 Glycine max
Glyma.13G208800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 32278381-32280380 Glycine max
Glyma.13G208800 2.0kb downstream 2.0kb downstream 9168 true Chr13: 32269213-32278380 Glycine max
Glyma.13G208800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 32269213-32271212 Glycine max
Glyma.13G208800 5.0kb upstream 5.0kb upstream 12168 true Chr13: 32271213-32283380 Glycine max
Glyma.13G208800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 32278381-32283380 Glycine max
Glyma.13G208800 5.0kb downstream 5.0kb downstream 12168 true Chr13: 32266213-32278380 Glycine max
Glyma.13G208800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 32266213-32271212 Glycine max
Glyma.13G208800 10.0kb upstream 10.0kb upstream 17168 true Chr13: 32271213-32288380 Glycine max
Glyma.13G208800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 32278381-32288380 Glycine max
Glyma.13G208800 10.0kb downstream 10.0kb downstream 17168 true Chr13: 32261213-32278380 Glycine max
Glyma.13G208800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 32261213-32271212 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310014 5265 Fabidae View MSA
124066129 5270 Rosid View MSA
123740563 5271 Pentapetalae View MSA
122790224 5272 Eudicot View MSA
122051271 5273 Angiosperm View MSA
121349848 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.1396 0.0 28.5901   Low
cufflinks 16.1425 0.0 43.7699    
cufflinks 14.9258 0.0 40.6348    
cufflinks 13.3324 0.0 36.6022    
cufflinks 12.8503 0.0 35.3888    
cufflinks 18.1104 0.0 48.8063   High
cufflinks 11.5737 0.0 32.1613    
cufflinks 13.2688 0.0 36.4184    
cufflinks 14.1572 0.0 38.6601    
cufflinks 2.03        
cufflinks 2.398        
cufflinks 1.943       Low
cufflinks 2.187        
cufflinks 2.275        
cufflinks 2.122        
cufflinks 2.37        
cufflinks 1.828       Low
cufflinks 2.312        
cufflinks 2.218        
cufflinks 2.419        
cufflinks 2.679       High
cufflinks 2.448        
cufflinks 1.879       Low
cufflinks 2.637       High
cufflinks 2.351        
cufflinks 2.052        

0 Strain