Gene : Glyma.13G209600 G. max Wm82.a2.v1
Defline:  (1 of 8) PTHR16007//PTHR16007:SF29 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED Genomic Order:  2096
Name:  ? Glyma.13G209600 Secondary Identifier:  ? PAC:30505705
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G209600 0.5kb upstream 0.5kb upstream 2076 true Chr13: 32357965-32360040 Glycine max
Glyma.13G209600 0.5kb upstream 0.5kb upstream 500 false Chr13: 32359541-32360040 Glycine max
Glyma.13G209600 0.5kb downstream 0.5kb downstream 2076 true Chr13: 32357465-32359540 Glycine max
Glyma.13G209600 0.5kb downstream 0.5kb downstream 500 false Chr13: 32357465-32357964 Glycine max
Glyma.13G209600 1.0kb upstream 1.0kb upstream 2576 true Chr13: 32357965-32360540 Glycine max
Glyma.13G209600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 32359541-32360540 Glycine max
Glyma.13G209600 1.0kb downstream 1.0kb downstream 2576 true Chr13: 32356965-32359540 Glycine max
Glyma.13G209600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 32356965-32357964 Glycine max
Glyma.13G209600 2.0kb upstream 2.0kb upstream 3576 true Chr13: 32357965-32361540 Glycine max
Glyma.13G209600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 32359541-32361540 Glycine max
Glyma.13G209600 2.0kb downstream 2.0kb downstream 3576 true Chr13: 32355965-32359540 Glycine max
Glyma.13G209600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 32355965-32357964 Glycine max
Glyma.13G209600 5.0kb upstream 5.0kb upstream 6576 true Chr13: 32357965-32364540 Glycine max
Glyma.13G209600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 32359541-32364540 Glycine max
Glyma.13G209600 5.0kb downstream 5.0kb downstream 6576 true Chr13: 32352965-32359540 Glycine max
Glyma.13G209600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 32352965-32357964 Glycine max
Glyma.13G209600 10.0kb upstream 10.0kb upstream 11576 true Chr13: 32357965-32369540 Glycine max
Glyma.13G209600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 32359541-32369540 Glycine max
Glyma.13G209600 10.0kb downstream 10.0kb downstream 11576 true Chr13: 32347965-32359540 Glycine max
Glyma.13G209600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 32347965-32357964 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312621 5265 Fabidae View MSA
124068390 5270 Rosid View MSA
123738085 5271 Pentapetalae View MSA
122788198 5272 Eudicot View MSA
122043341 5273 Angiosperm View MSA
121350277 5274 Embryophyte View MSA
123426219 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.30295 0.0 4.68348    
cufflinks 0.0965786 0.0 0.389958 Low Low
cufflinks 0.67307 0.0 2.51132    
cufflinks 0.41051 0.0 1.56541    
cufflinks 8.94912 0.0 25.5423   High
cufflinks 28.4154 0.0 75.8091 High High
cufflinks 0.632256 0.0 2.36309    
cufflinks 0.0970075 0.0 0.391335 Low Low
cufflinks 5.35621 0.0 16.3428    
cufflinks 0.454        
cufflinks 90.847     High High
cufflinks 0.193        
cufflinks 5.745        
cufflinks 4.229        
cufflinks 40.074     High High
cufflinks 0.047     Low Low
cufflinks 6.967     High  
cufflinks 0.054     Low Low
cufflinks 0.295        
cufflinks 0.023     Low Low
cufflinks 81.739     High High
cufflinks 0.04     Low Low
cufflinks 0.452        
cufflinks 18.639     High  
cufflinks 0.037     Low Low
cufflinks 48.177     High High

0 Strain