Gene : Glyma.13G212300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR14859 - CALCOFLUOR WHITE HYPERSENSITIVE PROTEIN PRECURSOR Genomic Order:  2123
Name:  ? Glyma.13G212300 Secondary Identifier:  ? PAC:30503698
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G212300 0.5kb upstream 0.5kb upstream 3060 true Chr13: 32594682-32597741 Glycine max
Glyma.13G212300 0.5kb upstream 0.5kb upstream 500 false Chr13: 32594682-32595181 Glycine max
Glyma.13G212300 0.5kb downstream 0.5kb downstream 3060 true Chr13: 32595182-32598241 Glycine max
Glyma.13G212300 0.5kb downstream 0.5kb downstream 500 false Chr13: 32597742-32598241 Glycine max
Glyma.13G212300 1.0kb upstream 1.0kb upstream 3560 true Chr13: 32594182-32597741 Glycine max
Glyma.13G212300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 32594182-32595181 Glycine max
Glyma.13G212300 1.0kb downstream 1.0kb downstream 3560 true Chr13: 32595182-32598741 Glycine max
Glyma.13G212300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 32597742-32598741 Glycine max
Glyma.13G212300 2.0kb upstream 2.0kb upstream 4560 true Chr13: 32593182-32597741 Glycine max
Glyma.13G212300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 32593182-32595181 Glycine max
Glyma.13G212300 2.0kb downstream 2.0kb downstream 4560 true Chr13: 32595182-32599741 Glycine max
Glyma.13G212300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 32597742-32599741 Glycine max
Glyma.13G212300 5.0kb upstream 5.0kb upstream 7560 true Chr13: 32590182-32597741 Glycine max
Glyma.13G212300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 32590182-32595181 Glycine max
Glyma.13G212300 5.0kb downstream 5.0kb downstream 7560 true Chr13: 32595182-32602741 Glycine max
Glyma.13G212300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 32597742-32602741 Glycine max
Glyma.13G212300 10.0kb upstream 10.0kb upstream 12560 true Chr13: 32585182-32597741 Glycine max
Glyma.13G212300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 32585182-32595181 Glycine max
Glyma.13G212300 10.0kb downstream 10.0kb downstream 12560 true Chr13: 32595182-32607741 Glycine max
Glyma.13G212300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 32597742-32607741 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296931 5265 Fabidae View MSA
124067214 5270 Rosid View MSA
123743998 5271 Pentapetalae View MSA
122789343 5272 Eudicot View MSA
122044704 5273 Angiosperm View MSA
121310332 5274 Embryophyte View MSA
123347845 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0514395 0.0 0.207439 Low Low
cufflinks 0.0197645 0.0 0.0844206 Low Low
cufflinks 0.281335 0.0 1.05772    
cufflinks 0.274398 0.0 1.03382    
cufflinks 0.868401 0.0 3.06332    
cufflinks 0.438507 0.0 1.61617    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.308658 0.0 1.15642    
cufflinks 3.0583 0.0 9.22276   High
cufflinks 0.126        
cufflinks 0.366        
cufflinks 0.26        
cufflinks 0.938        
cufflinks 0.083        
cufflinks 0.823        
cufflinks 0.008     Low Low
cufflinks 0.888        
cufflinks 0.236        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low Low
cufflinks 1.682       High
cufflinks 0.013     Low Low
cufflinks 0.022     Low  
cufflinks 2.354       High
cufflinks 0.008     Low Low
cufflinks 0.79        

0 Strain