Gene : Glyma.13G212400 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR31621:SF1 - DUF679 DOMAIN MEMBRANE PROTEIN 1 Genomic Order:  2124
Name:  ? Glyma.13G212400 Secondary Identifier:  ? PAC:30502475
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G212400 0.5kb upstream 0.5kb upstream 1397 true Chr13: 32599016-32600412 Glycine max
Glyma.13G212400 0.5kb upstream 0.5kb upstream 500 false Chr13: 32599913-32600412 Glycine max
Glyma.13G212400 0.5kb downstream 0.5kb downstream 1397 true Chr13: 32598516-32599912 Glycine max
Glyma.13G212400 0.5kb downstream 0.5kb downstream 500 false Chr13: 32598516-32599015 Glycine max
Glyma.13G212400 1.0kb upstream 1.0kb upstream 1897 true Chr13: 32599016-32600912 Glycine max
Glyma.13G212400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 32599913-32600912 Glycine max
Glyma.13G212400 1.0kb downstream 1.0kb downstream 1897 true Chr13: 32598016-32599912 Glycine max
Glyma.13G212400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 32598016-32599015 Glycine max
Glyma.13G212400 2.0kb upstream 2.0kb upstream 2897 true Chr13: 32599016-32601912 Glycine max
Glyma.13G212400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 32599913-32601912 Glycine max
Glyma.13G212400 2.0kb downstream 2.0kb downstream 2897 true Chr13: 32597016-32599912 Glycine max
Glyma.13G212400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 32597016-32599015 Glycine max
Glyma.13G212400 5.0kb upstream 5.0kb upstream 5897 true Chr13: 32599016-32604912 Glycine max
Glyma.13G212400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 32599913-32604912 Glycine max
Glyma.13G212400 5.0kb downstream 5.0kb downstream 5897 true Chr13: 32594016-32599912 Glycine max
Glyma.13G212400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 32594016-32599015 Glycine max
Glyma.13G212400 10.0kb upstream 10.0kb upstream 10897 true Chr13: 32599016-32609912 Glycine max
Glyma.13G212400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 32599913-32609912 Glycine max
Glyma.13G212400 10.0kb downstream 10.0kb downstream 10897 true Chr13: 32589016-32599912 Glycine max
Glyma.13G212400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 32589016-32599015 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310165 5265 Fabidae View MSA
124066141 5270 Rosid View MSA
123749826 5271 Pentapetalae View MSA
122795559 5272 Eudicot View MSA
122046671 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.18064 0.0 11.1261    
cufflinks 3.64454 0.0 12.6135    
cufflinks 122.328 0.0 338.755 High High
cufflinks 2.80165 0.0 9.91545    
cufflinks 2.82012 0.0 9.92428    
cufflinks 6.36247 0.0 20.483    
cufflinks 2.23644 0.0 8.01187    
cufflinks 17.7434 0.0 50.0631    
cufflinks 4.74115 0.0 15.8832    
cufflinks 9.7     High High
cufflinks 1.291        
cufflinks 25.117     High High
cufflinks 4.202        
cufflinks 0.331       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.627        
cufflinks 2.24        
cufflinks 12.126     High High
cufflinks 2.306        
cufflinks 4.33        
cufflinks 1.725        
cufflinks 5.245        
cufflinks 4.984        
cufflinks 1.139       Low
cufflinks 4.104        
cufflinks 2.185        

0 Strain