Gene : Glyma.13G254300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR31066:SF2 - GB Genomic Order:  2543
Name:  ? Glyma.13G254300 Secondary Identifier:  ? PAC:30500283
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G254300 0.5kb upstream 0.5kb upstream 2256 true Chr13: 36014147-36016402 Glycine max
Glyma.13G254300 0.5kb upstream 0.5kb upstream 500 false Chr13: 36014147-36014646 Glycine max
Glyma.13G254300 0.5kb downstream 0.5kb downstream 2256 true Chr13: 36014647-36016902 Glycine max
Glyma.13G254300 0.5kb downstream 0.5kb downstream 500 false Chr13: 36016403-36016902 Glycine max
Glyma.13G254300 1.0kb upstream 1.0kb upstream 2756 true Chr13: 36013647-36016402 Glycine max
Glyma.13G254300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 36013647-36014646 Glycine max
Glyma.13G254300 1.0kb downstream 1.0kb downstream 2756 true Chr13: 36014647-36017402 Glycine max
Glyma.13G254300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 36016403-36017402 Glycine max
Glyma.13G254300 2.0kb upstream 2.0kb upstream 3756 true Chr13: 36012647-36016402 Glycine max
Glyma.13G254300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 36012647-36014646 Glycine max
Glyma.13G254300 2.0kb downstream 2.0kb downstream 3756 true Chr13: 36014647-36018402 Glycine max
Glyma.13G254300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 36016403-36018402 Glycine max
Glyma.13G254300 5.0kb upstream 5.0kb upstream 6756 true Chr13: 36009647-36016402 Glycine max
Glyma.13G254300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 36009647-36014646 Glycine max
Glyma.13G254300 5.0kb downstream 5.0kb downstream 6756 true Chr13: 36014647-36021402 Glycine max
Glyma.13G254300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 36016403-36021402 Glycine max
Glyma.13G254300 10.0kb upstream 10.0kb upstream 11756 true Chr13: 36004647-36016402 Glycine max
Glyma.13G254300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 36004647-36014646 Glycine max
Glyma.13G254300 10.0kb downstream 10.0kb downstream 11756 true Chr13: 36014647-36026402 Glycine max
Glyma.13G254300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 36016403-36026402 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311739 5265 Fabidae View MSA
124072365 5270 Rosid View MSA
123740761 5271 Pentapetalae View MSA
122794728 5272 Eudicot View MSA
122047494 5273 Angiosperm View MSA
121310747 5274 Embryophyte View MSA
123348158 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.82114 0.0 21.7983    
cufflinks 6.97106 0.0 19.765    
cufflinks 37.2054 0.0 100.698 High High
cufflinks 5.72915 0.0 16.613   Low
cufflinks 19.9867 0.0 53.3343 High  
cufflinks 11.037 0.0 29.9397    
cufflinks 8.82138 0.0 24.2929    
cufflinks 16.0294 0.0 42.9192    
cufflinks 15.3965 0.0 41.2188    
cufflinks 2.505        
cufflinks 17.566     High High
cufflinks 13.134     High High
cufflinks 1.23       Low
cufflinks 1.249       Low
cufflinks 7.52     High  
cufflinks 2.483        
cufflinks 2.418        
cufflinks 6.448        
cufflinks 4.148        
cufflinks 4.318        
cufflinks 9.233     High  
cufflinks 3.194        
cufflinks 1.407       Low
cufflinks 18.631     High High
cufflinks 3.415        
cufflinks 6.727     High  

0 Strain