Gene : Glyma.13G257200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11002//PTHR11002:SF12 - CARBONIC ANHYDRASE Genomic Order:  2572
Name:  ? Glyma.13G257200 Secondary Identifier:  ? PAC:30504724
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax CYANCAT-PWY Glycine max pathologic  
Gmax PWY-241 Glycine max pathologic  
Gmax PWY-7115 Glycine max pathologic  
Gmax PWY-7117 Glycine max pathologic  
Gmax PWYQT-4429 Glycine max pathologic  

Genomics

Gene Ontology Displayer

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G257200 0.5kb upstream 0.5kb upstream 5104 true Chr13: 36253322-36258425 Glycine max
Glyma.13G257200 0.5kb upstream 0.5kb upstream 500 false Chr13: 36253322-36253821 Glycine max
Glyma.13G257200 0.5kb downstream 0.5kb downstream 5104 true Chr13: 36253822-36258925 Glycine max
Glyma.13G257200 0.5kb downstream 0.5kb downstream 500 false Chr13: 36258426-36258925 Glycine max
Glyma.13G257200 1.0kb upstream 1.0kb upstream 5604 true Chr13: 36252822-36258425 Glycine max
Glyma.13G257200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 36252822-36253821 Glycine max
Glyma.13G257200 1.0kb downstream 1.0kb downstream 5604 true Chr13: 36253822-36259425 Glycine max
Glyma.13G257200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 36258426-36259425 Glycine max
Glyma.13G257200 2.0kb upstream 2.0kb upstream 6604 true Chr13: 36251822-36258425 Glycine max
Glyma.13G257200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 36251822-36253821 Glycine max
Glyma.13G257200 2.0kb downstream 2.0kb downstream 6604 true Chr13: 36253822-36260425 Glycine max
Glyma.13G257200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 36258426-36260425 Glycine max
Glyma.13G257200 5.0kb upstream 5.0kb upstream 9604 true Chr13: 36248822-36258425 Glycine max
Glyma.13G257200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 36248822-36253821 Glycine max
Glyma.13G257200 5.0kb downstream 5.0kb downstream 9604 true Chr13: 36253822-36263425 Glycine max
Glyma.13G257200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 36258426-36263425 Glycine max
Glyma.13G257200 10.0kb upstream 10.0kb upstream 14604 true Chr13: 36243822-36258425 Glycine max
Glyma.13G257200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 36243822-36253821 Glycine max
Glyma.13G257200 10.0kb downstream 10.0kb downstream 14604 true Chr13: 36253822-36268425 Glycine max
Glyma.13G257200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 36258426-36268425 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306055 5265 Fabidae View MSA
124068244 5270 Rosid View MSA
123749741 5271 Pentapetalae View MSA
122787175 5272 Eudicot View MSA
122042503 5273 Angiosperm View MSA
121348783 5274 Embryophyte View MSA
123427888 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.2185 0.0 18.2986    
cufflinks 7.41103 0.0 23.966    
cufflinks 13.3091 0.0 39.8678   High
cufflinks 9.86935 0.0 30.4975    
cufflinks 6.07499 0.0 20.6443    
cufflinks 12.4069 0.0 37.5294   High
cufflinks 2.99399 0.0 9.63093   Low
cufflinks 5.61825 0.0 19.3075    
cufflinks 4.04868 0.0 15.2844    
cufflinks 3.424        
cufflinks 0.385       Low
cufflinks 5.896       High
cufflinks 3.996        
cufflinks 3.883        
cufflinks 0.148       Low
cufflinks 3.124        
cufflinks 1.837        
cufflinks 4.401        
cufflinks 3.22        
cufflinks 2.275        
cufflinks 0.478       Low
cufflinks 2.383        
cufflinks 5.25        
cufflinks 0.248       Low
cufflinks 3.015        
cufflinks 1.299        

0 Strain