Gene : Glyma.13G258800 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR33694:SF1 - UDP-3-O-[3-HYDROXYMYRISTOYL] N-ACETYLGLUCOSAMINE DEACETYLASE Genomic Order:  2588
Name:  ? Glyma.13G258800 Secondary Identifier:  ? PAC:30501486
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G258800 0.5kb upstream 0.5kb upstream 4950 true Chr13: 36302878-36307827 Glycine max
Glyma.13G258800 0.5kb upstream 0.5kb upstream 500 false Chr13: 36307328-36307827 Glycine max
Glyma.13G258800 0.5kb downstream 0.5kb downstream 4950 true Chr13: 36302378-36307327 Glycine max
Glyma.13G258800 0.5kb downstream 0.5kb downstream 500 false Chr13: 36302378-36302877 Glycine max
Glyma.13G258800 1.0kb upstream 1.0kb upstream 5450 true Chr13: 36302878-36308327 Glycine max
Glyma.13G258800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 36307328-36308327 Glycine max
Glyma.13G258800 1.0kb downstream 1.0kb downstream 5450 true Chr13: 36301878-36307327 Glycine max
Glyma.13G258800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 36301878-36302877 Glycine max
Glyma.13G258800 2.0kb upstream 2.0kb upstream 6450 true Chr13: 36302878-36309327 Glycine max
Glyma.13G258800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 36307328-36309327 Glycine max
Glyma.13G258800 2.0kb downstream 2.0kb downstream 6450 true Chr13: 36300878-36307327 Glycine max
Glyma.13G258800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 36300878-36302877 Glycine max
Glyma.13G258800 5.0kb upstream 5.0kb upstream 9450 true Chr13: 36302878-36312327 Glycine max
Glyma.13G258800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 36307328-36312327 Glycine max
Glyma.13G258800 5.0kb downstream 5.0kb downstream 9450 true Chr13: 36297878-36307327 Glycine max
Glyma.13G258800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 36297878-36302877 Glycine max
Glyma.13G258800 10.0kb upstream 10.0kb upstream 14450 true Chr13: 36302878-36317327 Glycine max
Glyma.13G258800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 36307328-36317327 Glycine max
Glyma.13G258800 10.0kb downstream 10.0kb downstream 14450 true Chr13: 36292878-36307327 Glycine max
Glyma.13G258800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 36292878-36302877 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121615292 5273 Angiosperm View MSA
122250085 5265 Fabidae View MSA
123993398 5270 Rosid View MSA
123568181 5271 Pentapetalae View MSA
122602928 5272 Eudicot View MSA
120887488 5274 Embryophyte View MSA
122928243 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.20043 0.0 7.23321    
cufflinks 3.46265 0.0 10.6602   High
cufflinks 2.73978 0.0 8.70308    
cufflinks 1.62321 0.0 5.52859    
cufflinks 1.17519 0.0 4.13084    
cufflinks 0.572598 0.0 2.10895   Low
cufflinks 2.4274 0.0 7.87816    
cufflinks 1.72231 0.0 5.83484    
cufflinks 1.48764 0.0 5.11185    
cufflinks 0.23        
cufflinks 0.043     Low Low
cufflinks 0.611        
cufflinks 0.168        
cufflinks 0.228        
cufflinks 0.131        
cufflinks 0.592        
cufflinks 0.037     Low Low
cufflinks 0.465        
cufflinks 0.638        
cufflinks 0.712        
cufflinks 0.027     Low Low
cufflinks 0.652        
cufflinks 0.75       High
cufflinks 0.039     Low Low
cufflinks 0.786       High
cufflinks 0.03     Low Low

0 Strain