Gene : Glyma.13G248100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12931 - UBIQUITIN THIOLESTERASE PROTEIN OTUB Genomic Order:  2481
Name:  ? Glyma.13G248100 Secondary Identifier:  ? PAC:30503691
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G248100 0.5kb upstream 0.5kb upstream 4449 true Chr13: 35630638-35635086 Glycine max
Glyma.13G248100 0.5kb upstream 0.5kb upstream 500 false Chr13: 35630638-35631137 Glycine max
Glyma.13G248100 0.5kb downstream 0.5kb downstream 4449 true Chr13: 35631138-35635586 Glycine max
Glyma.13G248100 0.5kb downstream 0.5kb downstream 500 false Chr13: 35635087-35635586 Glycine max
Glyma.13G248100 1.0kb upstream 1.0kb upstream 4949 true Chr13: 35630138-35635086 Glycine max
Glyma.13G248100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 35630138-35631137 Glycine max
Glyma.13G248100 1.0kb downstream 1.0kb downstream 4949 true Chr13: 35631138-35636086 Glycine max
Glyma.13G248100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 35635087-35636086 Glycine max
Glyma.13G248100 2.0kb upstream 2.0kb upstream 5949 true Chr13: 35629138-35635086 Glycine max
Glyma.13G248100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 35629138-35631137 Glycine max
Glyma.13G248100 2.0kb downstream 2.0kb downstream 5949 true Chr13: 35631138-35637086 Glycine max
Glyma.13G248100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 35635087-35637086 Glycine max
Glyma.13G248100 5.0kb upstream 5.0kb upstream 8949 true Chr13: 35626138-35635086 Glycine max
Glyma.13G248100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 35626138-35631137 Glycine max
Glyma.13G248100 5.0kb downstream 5.0kb downstream 8949 true Chr13: 35631138-35640086 Glycine max
Glyma.13G248100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 35635087-35640086 Glycine max
Glyma.13G248100 10.0kb upstream 10.0kb upstream 13949 true Chr13: 35621138-35635086 Glycine max
Glyma.13G248100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 35621138-35631137 Glycine max
Glyma.13G248100 10.0kb downstream 10.0kb downstream 13949 true Chr13: 35631138-35645086 Glycine max
Glyma.13G248100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 35635087-35645086 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300395 5265 Fabidae View MSA
124065600 5270 Rosid View MSA
123752549 5271 Pentapetalae View MSA
122787068 5272 Eudicot View MSA
122043006 5273 Angiosperm View MSA
121344850 5274 Embryophyte View MSA
123424451 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.9132 0.0 96.753 High High
cufflinks 15.5768 0.0 46.9728   Low
cufflinks 34.5433 0.0 105.775 High High
cufflinks 19.8063 0.0 59.0401    
cufflinks 21.0972 0.0 62.838 High  
cufflinks 26.6872 0.0 79.7772 High  
cufflinks 18.0087 0.0 53.9614    
cufflinks 21.1869 0.0 62.9145 High  
cufflinks 22.8173 0.0 67.7295 High  
cufflinks 2.867        
cufflinks 0.971       Low
cufflinks 5.209       High
cufflinks 3.974       High
cufflinks 4.552       High
cufflinks 1.066       Low
cufflinks 2.707        
cufflinks 2.002        
cufflinks 3.423        
cufflinks 3.211        
cufflinks 2.803        
cufflinks 1.06       Low
cufflinks 2.765        
cufflinks 2.763        
cufflinks 1.24       Low
cufflinks 2.761        
cufflinks 1.526        

0 Strain