Gene : Glyma.13G252800 G. max Wm82.a2.v1
Defline:  (1 of 7) PTHR12064//PTHR12064:SF30 - ANCIENT CONSERVED DOMAIN PROTEIN-RELATED Genomic Order:  2528
Name:  ? Glyma.13G252800 Secondary Identifier:  ? PAC:30506124
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G252800 0.5kb upstream 0.5kb upstream 4774 true Chr13: 35916693-35921466 Glycine max
Glyma.13G252800 0.5kb upstream 0.5kb upstream 500 false Chr13: 35916693-35917192 Glycine max
Glyma.13G252800 0.5kb downstream 0.5kb downstream 4774 true Chr13: 35917193-35921966 Glycine max
Glyma.13G252800 0.5kb downstream 0.5kb downstream 500 false Chr13: 35921467-35921966 Glycine max
Glyma.13G252800 1.0kb upstream 1.0kb upstream 5274 true Chr13: 35916193-35921466 Glycine max
Glyma.13G252800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 35916193-35917192 Glycine max
Glyma.13G252800 1.0kb downstream 1.0kb downstream 5274 true Chr13: 35917193-35922466 Glycine max
Glyma.13G252800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 35921467-35922466 Glycine max
Glyma.13G252800 2.0kb upstream 2.0kb upstream 6274 true Chr13: 35915193-35921466 Glycine max
Glyma.13G252800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 35915193-35917192 Glycine max
Glyma.13G252800 2.0kb downstream 2.0kb downstream 6274 true Chr13: 35917193-35923466 Glycine max
Glyma.13G252800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 35921467-35923466 Glycine max
Glyma.13G252800 5.0kb upstream 5.0kb upstream 9274 true Chr13: 35912193-35921466 Glycine max
Glyma.13G252800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 35912193-35917192 Glycine max
Glyma.13G252800 5.0kb downstream 5.0kb downstream 9274 true Chr13: 35917193-35926466 Glycine max
Glyma.13G252800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 35921467-35926466 Glycine max
Glyma.13G252800 10.0kb upstream 10.0kb upstream 14274 true Chr13: 35907193-35921466 Glycine max
Glyma.13G252800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 35907193-35917192 Glycine max
Glyma.13G252800 10.0kb downstream 10.0kb downstream 14274 true Chr13: 35917193-35931466 Glycine max
Glyma.13G252800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 35921467-35931466 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122253956 5265 Fabidae View MSA
124071770 5270 Rosid View MSA
123746390 5271 Pentapetalae View MSA
122788672 5272 Eudicot View MSA
122046088 5273 Angiosperm View MSA
121348237 5274 Embryophyte View MSA
123426941 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.91057 0.0 15.7496    
cufflinks 2.53105 0.0 12.8378    
cufflinks 4.46631 0.0 18.0667    
cufflinks 1.10909 0.0 7.44162   Low
cufflinks 2.91458 0.0 13.5628    
cufflinks 1.21071 0.0 7.588    
cufflinks 0.829511 0.0 3.63649   Low
cufflinks 6.54626 0.0 21.5795    
cufflinks 13.9276 0.0 41.8354   High
cufflinks 1.178        
cufflinks 1.597       High
cufflinks 0.547        
cufflinks 0.29       Low
cufflinks 0.621        
cufflinks 1.124        
cufflinks 0.488        
cufflinks 0.59        
cufflinks 1.044        
cufflinks 0.356        
cufflinks 0.392        
cufflinks 0.882        
cufflinks 0.439        
cufflinks 0.204       Low
cufflinks 1.983       High
cufflinks 0.585        
cufflinks 1.027        

0 Strain