Gene : Glyma.13G253400 G. max Wm82.a2.v1
Genomic Order:  2534 Name:  ? Glyma.13G253400
Secondary Identifier:  ? PAC:30500860
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G253400 0.5kb upstream 0.5kb upstream 2179 true Chr13: 35958196-35960374 Glycine max
Glyma.13G253400 0.5kb upstream 0.5kb upstream 500 false Chr13: 35959875-35960374 Glycine max
Glyma.13G253400 0.5kb downstream 0.5kb downstream 2179 true Chr13: 35957696-35959874 Glycine max
Glyma.13G253400 0.5kb downstream 0.5kb downstream 500 false Chr13: 35957696-35958195 Glycine max
Glyma.13G253400 1.0kb upstream 1.0kb upstream 2679 true Chr13: 35958196-35960874 Glycine max
Glyma.13G253400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 35959875-35960874 Glycine max
Glyma.13G253400 1.0kb downstream 1.0kb downstream 2679 true Chr13: 35957196-35959874 Glycine max
Glyma.13G253400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 35957196-35958195 Glycine max
Glyma.13G253400 2.0kb upstream 2.0kb upstream 3679 true Chr13: 35958196-35961874 Glycine max
Glyma.13G253400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 35959875-35961874 Glycine max
Glyma.13G253400 2.0kb downstream 2.0kb downstream 3679 true Chr13: 35956196-35959874 Glycine max
Glyma.13G253400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 35956196-35958195 Glycine max
Glyma.13G253400 5.0kb upstream 5.0kb upstream 6679 true Chr13: 35958196-35964874 Glycine max
Glyma.13G253400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 35959875-35964874 Glycine max
Glyma.13G253400 5.0kb downstream 5.0kb downstream 6679 true Chr13: 35953196-35959874 Glycine max
Glyma.13G253400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 35953196-35958195 Glycine max
Glyma.13G253400 10.0kb upstream 10.0kb upstream 11679 true Chr13: 35958196-35969874 Glycine max
Glyma.13G253400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 35959875-35969874 Glycine max
Glyma.13G253400 10.0kb downstream 10.0kb downstream 11679 true Chr13: 35948196-35959874 Glycine max
Glyma.13G253400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 35948196-35958195 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304038 5265 Fabidae View MSA
124063683 5270 Rosid View MSA
123738028 5271 Pentapetalae View MSA
122792537 5272 Eudicot View MSA
122047025 5273 Angiosperm View MSA
121345668 5274 Embryophyte View MSA
123426793 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.01992 0.0 14.7865   Low
cufflinks 4.62431 0.0 13.794   Low
cufflinks 11.9578 0.0 32.4597   High
cufflinks 10.6952 0.0 29.1863    
cufflinks 7.15116 0.0 20.1206    
cufflinks 13.2311 0.0 35.64   High
cufflinks 6.24254 0.0 17.8527    
cufflinks 6.87361 0.0 19.456    
cufflinks 6.94809 0.0 19.6264    
cufflinks 9.69     High  
cufflinks 10.681     High High
cufflinks 10.417     High High
cufflinks 5.769        
cufflinks 3.734       Low
cufflinks 10.501     High High
cufflinks 4.195        
cufflinks 11.496     High High
cufflinks 7.232        
cufflinks 4.189        
cufflinks 3.6       Low
cufflinks 7.265     High  
cufflinks 3.729       Low
cufflinks 4.627        
cufflinks 9.377     High  
cufflinks 3.497       Low
cufflinks 10.918     High High

0 Strain