Gene : Glyma.13G241300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10639:SF7 - CLATHRIN LIGHT CHAIN Genomic Order:  2413
Name:  ? Glyma.13G241300 Secondary Identifier:  ? PAC:30504257
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G241300 0.5kb upstream 0.5kb upstream 3977 true Chr13: 35130654-35134630 Glycine max
Glyma.13G241300 0.5kb upstream 0.5kb upstream 500 false Chr13: 35134131-35134630 Glycine max
Glyma.13G241300 0.5kb downstream 0.5kb downstream 3977 true Chr13: 35130154-35134130 Glycine max
Glyma.13G241300 0.5kb downstream 0.5kb downstream 500 false Chr13: 35130154-35130653 Glycine max
Glyma.13G241300 1.0kb upstream 1.0kb upstream 4477 true Chr13: 35130654-35135130 Glycine max
Glyma.13G241300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 35134131-35135130 Glycine max
Glyma.13G241300 1.0kb downstream 1.0kb downstream 4477 true Chr13: 35129654-35134130 Glycine max
Glyma.13G241300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 35129654-35130653 Glycine max
Glyma.13G241300 2.0kb upstream 2.0kb upstream 5477 true Chr13: 35130654-35136130 Glycine max
Glyma.13G241300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 35134131-35136130 Glycine max
Glyma.13G241300 2.0kb downstream 2.0kb downstream 5477 true Chr13: 35128654-35134130 Glycine max
Glyma.13G241300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 35128654-35130653 Glycine max
Glyma.13G241300 5.0kb upstream 5.0kb upstream 8477 true Chr13: 35130654-35139130 Glycine max
Glyma.13G241300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 35134131-35139130 Glycine max
Glyma.13G241300 5.0kb downstream 5.0kb downstream 8477 true Chr13: 35125654-35134130 Glycine max
Glyma.13G241300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 35125654-35130653 Glycine max
Glyma.13G241300 10.0kb upstream 10.0kb upstream 13477 true Chr13: 35130654-35144130 Glycine max
Glyma.13G241300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 35134131-35144130 Glycine max
Glyma.13G241300 10.0kb downstream 10.0kb downstream 13477 true Chr13: 35120654-35134130 Glycine max
Glyma.13G241300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 35120654-35130653 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300779 5265 Fabidae View MSA
124061601 5270 Rosid View MSA
123752626 5271 Pentapetalae View MSA
122796141 5272 Eudicot View MSA
122042029 5273 Angiosperm View MSA
121347289 5274 Embryophyte View MSA
123426291 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 58.0156 0.0 163.181 High  
cufflinks 40.2472 0.0 109.436 High Low
cufflinks 40.9875 0.0 111.407 High Low
cufflinks 52.0902 0.0 144.824 High  
cufflinks 60.1859 0.0 170.637 High  
cufflinks 58.2931 0.0 164.098 High  
cufflinks 54.992 0.0 153.627 High  
cufflinks 58.8812 0.0 165.9 High  
cufflinks 50.318 0.0 139.493 High  
cufflinks 22.469     High  
cufflinks 18.985     High  
cufflinks 15.13     High Low
cufflinks 28.099     High High
cufflinks 27.743     High High
cufflinks 16.022     High  
cufflinks 17.494     High  
cufflinks 19.991     High  
cufflinks 18.528     High  
cufflinks 18.192     High  
cufflinks 14.462     High Low
cufflinks 21.176     High  
cufflinks 16.525     High  
cufflinks 18.114     High  
cufflinks 23.504     High High
cufflinks 14.914     High Low
cufflinks 21.753     High  

0 Strain