Gene : Glyma.13G242000 G. max Wm82.a2.v1
Defline:  (1 of 8) 1.14.18.1 - Tyrosinase / Tyrosine-dopa oxidase Genomic Order:  2420
Name:  ? Glyma.13G242000 Secondary Identifier:  ? PAC:30503276
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6481 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G242000 0.5kb upstream 0.5kb upstream 1675 true Chr13: 35187187-35188861 Glycine max
Glyma.13G242000 0.5kb upstream 0.5kb upstream 500 false Chr13: 35187187-35187686 Glycine max
Glyma.13G242000 0.5kb downstream 0.5kb downstream 1675 true Chr13: 35187687-35189361 Glycine max
Glyma.13G242000 0.5kb downstream 0.5kb downstream 500 false Chr13: 35188862-35189361 Glycine max
Glyma.13G242000 1.0kb upstream 1.0kb upstream 2175 true Chr13: 35186687-35188861 Glycine max
Glyma.13G242000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 35186687-35187686 Glycine max
Glyma.13G242000 1.0kb downstream 1.0kb downstream 2175 true Chr13: 35187687-35189861 Glycine max
Glyma.13G242000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 35188862-35189861 Glycine max
Glyma.13G242000 2.0kb upstream 2.0kb upstream 3175 true Chr13: 35185687-35188861 Glycine max
Glyma.13G242000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 35185687-35187686 Glycine max
Glyma.13G242000 2.0kb downstream 2.0kb downstream 3175 true Chr13: 35187687-35190861 Glycine max
Glyma.13G242000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 35188862-35190861 Glycine max
Glyma.13G242000 5.0kb upstream 5.0kb upstream 6175 true Chr13: 35182687-35188861 Glycine max
Glyma.13G242000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 35182687-35187686 Glycine max
Glyma.13G242000 5.0kb downstream 5.0kb downstream 6175 true Chr13: 35187687-35193861 Glycine max
Glyma.13G242000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 35188862-35193861 Glycine max
Glyma.13G242000 10.0kb upstream 10.0kb upstream 11175 true Chr13: 35177687-35188861 Glycine max
Glyma.13G242000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 35177687-35187686 Glycine max
Glyma.13G242000 10.0kb downstream 10.0kb downstream 11175 true Chr13: 35187687-35198861 Glycine max
Glyma.13G242000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 35188862-35198861 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028792 5273 Angiosperm View MSA
122312856 5265 Fabidae View MSA
124074156 5270 Rosid View MSA
123752229 5271 Pentapetalae View MSA
122797227 5272 Eudicot View MSA
121351024 5274 Embryophyte View MSA
123381978 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 43.4591 0.0 116.812 High  
cufflinks 27.0398 0.0 72.1729 High  
cufflinks 73.4944 0.0 205.037 High High
cufflinks 30.1361 0.0 80.4016 High  
cufflinks 12.8901 0.0 35.5954    
cufflinks 7.43674 0.0 21.8423   Low
cufflinks 20.4655 0.0 54.9569    
cufflinks 39.9786 0.0 107.15 High  
cufflinks 10.9737 0.0 30.7475   Low
cufflinks 26.533     High  
cufflinks 2.316       Low
cufflinks 32.006     High High
cufflinks 3.002       Low
cufflinks 2.968       Low
cufflinks 2.922       Low
cufflinks 22.049     High  
cufflinks 4.928        
cufflinks 21.245     High  
cufflinks 17.655     High  
cufflinks 29.706     High High
cufflinks 5.201        
cufflinks 28.484     High High
cufflinks 17.815     High  
cufflinks 3.77        
cufflinks 28.764     High High
cufflinks 4.824        

0 Strain