Gene : Glyma.13G242100 G. max Wm82.a2.v1
Defline:  (1 of 12) PTHR11772//PTHR11772:SF14 - ASPARAGINE SYNTHETASE Genomic Order:  2421
Name:  ? Glyma.13G242100 Secondary Identifier:  ? PAC:30500770
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G242100 0.5kb upstream 0.5kb upstream 2742 true Chr13: 35189445-35192186 Glycine max
Glyma.13G242100 0.5kb upstream 0.5kb upstream 500 false Chr13: 35191687-35192186 Glycine max
Glyma.13G242100 0.5kb downstream 0.5kb downstream 2742 true Chr13: 35188945-35191686 Glycine max
Glyma.13G242100 0.5kb downstream 0.5kb downstream 500 false Chr13: 35188945-35189444 Glycine max
Glyma.13G242100 1.0kb upstream 1.0kb upstream 3242 true Chr13: 35189445-35192686 Glycine max
Glyma.13G242100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 35191687-35192686 Glycine max
Glyma.13G242100 1.0kb downstream 1.0kb downstream 3242 true Chr13: 35188445-35191686 Glycine max
Glyma.13G242100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 35188445-35189444 Glycine max
Glyma.13G242100 2.0kb upstream 2.0kb upstream 4242 true Chr13: 35189445-35193686 Glycine max
Glyma.13G242100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 35191687-35193686 Glycine max
Glyma.13G242100 2.0kb downstream 2.0kb downstream 4242 true Chr13: 35187445-35191686 Glycine max
Glyma.13G242100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 35187445-35189444 Glycine max
Glyma.13G242100 5.0kb upstream 5.0kb upstream 7242 true Chr13: 35189445-35196686 Glycine max
Glyma.13G242100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 35191687-35196686 Glycine max
Glyma.13G242100 5.0kb downstream 5.0kb downstream 7242 true Chr13: 35184445-35191686 Glycine max
Glyma.13G242100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 35184445-35189444 Glycine max
Glyma.13G242100 10.0kb upstream 10.0kb upstream 12242 true Chr13: 35189445-35201686 Glycine max
Glyma.13G242100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 35191687-35201686 Glycine max
Glyma.13G242100 10.0kb downstream 10.0kb downstream 12242 true Chr13: 35179445-35191686 Glycine max
Glyma.13G242100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 35179445-35189444 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307105 5265 Fabidae View MSA
124072477 5270 Rosid View MSA
123746642 5271 Pentapetalae View MSA
122787862 5272 Eudicot View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.53476 0.0 12.6081    
cufflinks 0.109116 0.0 0.439371 Low Low
cufflinks 23.6453 0.0 80.5773 High High
cufflinks 1.35371 0.0 7.76993    
cufflinks 8.83692 0.0 31.6686    
cufflinks 15.2106 0.0 47.0272    
cufflinks 1.46883 0.0 8.24268    
cufflinks 0.0733122 0.0 0.302953 Low Low
cufflinks 8.45955 0.0 30.117    
cufflinks 1.283       Low
cufflinks 466.115     High High
cufflinks 2.898        
cufflinks 4.271        
cufflinks 8.55     High  
cufflinks 547.978     High High
cufflinks 16.715     High  
cufflinks 7.164     High  
cufflinks 1.216       Low
cufflinks 0.793       Low
cufflinks 15.847     High  
cufflinks 323.171     High High
cufflinks 5.004        
cufflinks 1.772        
cufflinks 280.294     High High
cufflinks 23.08     High  
cufflinks 130.3     High  

0 Strain