Gene : Glyma.13G242800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR31008:SF6 - CSL1 Genomic Order:  2428
Name:  ? Glyma.13G242800 Secondary Identifier:  ? PAC:30503353
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G242800 0.5kb upstream 0.5kb upstream 6240 true Chr13: 35221700-35227939 Glycine max
Glyma.13G242800 0.5kb upstream 0.5kb upstream 500 false Chr13: 35227440-35227939 Glycine max
Glyma.13G242800 0.5kb downstream 0.5kb downstream 6240 true Chr13: 35221200-35227439 Glycine max
Glyma.13G242800 0.5kb downstream 0.5kb downstream 500 false Chr13: 35221200-35221699 Glycine max
Glyma.13G242800 1.0kb upstream 1.0kb upstream 6740 true Chr13: 35221700-35228439 Glycine max
Glyma.13G242800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 35227440-35228439 Glycine max
Glyma.13G242800 1.0kb downstream 1.0kb downstream 6740 true Chr13: 35220700-35227439 Glycine max
Glyma.13G242800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 35220700-35221699 Glycine max
Glyma.13G242800 2.0kb upstream 2.0kb upstream 7740 true Chr13: 35221700-35229439 Glycine max
Glyma.13G242800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 35227440-35229439 Glycine max
Glyma.13G242800 2.0kb downstream 2.0kb downstream 7740 true Chr13: 35219700-35227439 Glycine max
Glyma.13G242800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 35219700-35221699 Glycine max
Glyma.13G242800 5.0kb upstream 5.0kb upstream 10740 true Chr13: 35221700-35232439 Glycine max
Glyma.13G242800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 35227440-35232439 Glycine max
Glyma.13G242800 5.0kb downstream 5.0kb downstream 10740 true Chr13: 35216700-35227439 Glycine max
Glyma.13G242800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 35216700-35221699 Glycine max
Glyma.13G242800 10.0kb upstream 10.0kb upstream 15740 true Chr13: 35221700-35237439 Glycine max
Glyma.13G242800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 35227440-35237439 Glycine max
Glyma.13G242800 10.0kb downstream 10.0kb downstream 15740 true Chr13: 35211700-35227439 Glycine max
Glyma.13G242800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 35211700-35221699 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311812 5265 Fabidae View MSA
124066704 5270 Rosid View MSA
123751203 5271 Pentapetalae View MSA
122797098 5272 Eudicot View MSA
122048758 5273 Angiosperm View MSA
121350762 5274 Embryophyte View MSA
123381879 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.1768 0.0 24.4897    
cufflinks 7.50669 0.0 20.0428    
cufflinks 5.92956 0.0 15.9127    
cufflinks 9.53934 0.0 25.4727    
cufflinks 22.0759 0.0 61.8054 High High
cufflinks 11.541 0.0 30.9352    
cufflinks 3.58548 0.0 9.94848   Low
cufflinks 28.0564 0.0 81.0996 High High
cufflinks 11.9459 0.0 32.057    
cufflinks 34.096     High High
cufflinks 1.909       Low
cufflinks 7.523     High  
cufflinks 23.178     High High
cufflinks 29.429     High High
cufflinks 0.63       Low
cufflinks 14.721     High  
cufflinks 3.294        
cufflinks 20.522     High  
cufflinks 5.036        
cufflinks 13.523     High  
cufflinks 4.522        
cufflinks 12.452     High  
cufflinks 7.602     High  
cufflinks 1.8       Low
cufflinks 11.462     High  
cufflinks 6.07        

0 Strain