Gene : Glyma.13G243600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR10799:SF705 - SNF2 , HELICASE AND ZINC-FINGER DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2436
Name:  ? Glyma.13G243600 Secondary Identifier:  ? PAC:30502164
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G243600 0.5kb upstream 0.5kb upstream 10029 true Chr13: 35301659-35311687 Glycine max
Glyma.13G243600 0.5kb upstream 0.5kb upstream 500 false Chr13: 35311188-35311687 Glycine max
Glyma.13G243600 0.5kb downstream 0.5kb downstream 10029 true Chr13: 35301159-35311187 Glycine max
Glyma.13G243600 0.5kb downstream 0.5kb downstream 500 false Chr13: 35301159-35301658 Glycine max
Glyma.13G243600 1.0kb upstream 1.0kb upstream 10529 true Chr13: 35301659-35312187 Glycine max
Glyma.13G243600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 35311188-35312187 Glycine max
Glyma.13G243600 1.0kb downstream 1.0kb downstream 10529 true Chr13: 35300659-35311187 Glycine max
Glyma.13G243600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 35300659-35301658 Glycine max
Glyma.13G243600 2.0kb upstream 2.0kb upstream 11529 true Chr13: 35301659-35313187 Glycine max
Glyma.13G243600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 35311188-35313187 Glycine max
Glyma.13G243600 2.0kb downstream 2.0kb downstream 11529 true Chr13: 35299659-35311187 Glycine max
Glyma.13G243600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 35299659-35301658 Glycine max
Glyma.13G243600 5.0kb upstream 5.0kb upstream 14529 true Chr13: 35301659-35316187 Glycine max
Glyma.13G243600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 35311188-35316187 Glycine max
Glyma.13G243600 5.0kb downstream 5.0kb downstream 14529 true Chr13: 35296659-35311187 Glycine max
Glyma.13G243600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 35296659-35301658 Glycine max
Glyma.13G243600 10.0kb upstream 10.0kb upstream 19529 true Chr13: 35301659-35321187 Glycine max
Glyma.13G243600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 35311188-35321187 Glycine max
Glyma.13G243600 10.0kb downstream 10.0kb downstream 19529 true Chr13: 35291659-35311187 Glycine max
Glyma.13G243600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 35291659-35301658 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310152 5265 Fabidae View MSA
124061950 5270 Rosid View MSA
123743862 5271 Pentapetalae View MSA
122797067 5272 Eudicot View MSA
122048342 5273 Angiosperm View MSA
121347136 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.36265 0.0 28.7249   High
cufflinks 2.62179 0.0 8.53668   Low
cufflinks 8.78844 0.0 30.3588   High
cufflinks 4.66914 0.0 16.1762    
cufflinks 3.23048 0.0 10.1984    
cufflinks 5.8705 0.0 20.0568    
cufflinks 2.52695 0.0 8.40635   Low
cufflinks 6.09284 0.0 20.7996    
cufflinks 5.24784 0.0 18.0828    
cufflinks 1.769        
cufflinks 3.273       High
cufflinks 1.71        
cufflinks 1.157       Low
cufflinks 0.823       Low
cufflinks 2.496        
cufflinks 1.36        
cufflinks 2.491        
cufflinks 1.482        
cufflinks 1.229        
cufflinks 1.37        
cufflinks 2.618        
cufflinks 1.69        
cufflinks 1.557        
cufflinks 3.628       High
cufflinks 1.316        
cufflinks 3.345       High

0 Strain