Gene : Glyma.13G235100 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR31621:SF0 - DUF679 DOMAIN MEMBRANE PROTEIN 7 Genomic Order:  2351
Name:  ? Glyma.13G235100 Secondary Identifier:  ? PAC:30501962
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G235100 0.5kb upstream 0.5kb upstream 1457 true Chr13: 34582843-34584299 Glycine max
Glyma.13G235100 0.5kb upstream 0.5kb upstream 500 false Chr13: 34582843-34583342 Glycine max
Glyma.13G235100 0.5kb downstream 0.5kb downstream 1457 true Chr13: 34583343-34584799 Glycine max
Glyma.13G235100 0.5kb downstream 0.5kb downstream 500 false Chr13: 34584300-34584799 Glycine max
Glyma.13G235100 1.0kb upstream 1.0kb upstream 1957 true Chr13: 34582343-34584299 Glycine max
Glyma.13G235100 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34582343-34583342 Glycine max
Glyma.13G235100 1.0kb downstream 1.0kb downstream 1957 true Chr13: 34583343-34585299 Glycine max
Glyma.13G235100 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34584300-34585299 Glycine max
Glyma.13G235100 2.0kb upstream 2.0kb upstream 2957 true Chr13: 34581343-34584299 Glycine max
Glyma.13G235100 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34581343-34583342 Glycine max
Glyma.13G235100 2.0kb downstream 2.0kb downstream 2957 true Chr13: 34583343-34586299 Glycine max
Glyma.13G235100 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34584300-34586299 Glycine max
Glyma.13G235100 5.0kb upstream 5.0kb upstream 5957 true Chr13: 34578343-34584299 Glycine max
Glyma.13G235100 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34578343-34583342 Glycine max
Glyma.13G235100 5.0kb downstream 5.0kb downstream 5957 true Chr13: 34583343-34589299 Glycine max
Glyma.13G235100 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34584300-34589299 Glycine max
Glyma.13G235100 10.0kb upstream 10.0kb upstream 10957 true Chr13: 34573343-34584299 Glycine max
Glyma.13G235100 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34573343-34583342 Glycine max
Glyma.13G235100 10.0kb downstream 10.0kb downstream 10957 true Chr13: 34583343-34594299 Glycine max
Glyma.13G235100 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34584300-34594299 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314184 5265 Fabidae View MSA
124071441 5270 Rosid View MSA
123744074 5271 Pentapetalae View MSA
122789461 5272 Eudicot View MSA
122044570 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.26559 0.0 4.61922    
cufflinks 0.508261 0.0 1.93934   Low
cufflinks 6.56012 0.0 20.1146   High
cufflinks 3.56293 0.0 11.9011    
cufflinks 1.08321 0.0 3.98602    
cufflinks 2.0529 0.0 7.24283    
cufflinks 1.70832 0.0 6.10901    
cufflinks 5.35259 0.0 16.8422   High
cufflinks 2.50123 0.0 8.67212    
cufflinks 3.271       High
cufflinks 0.675        
cufflinks 4.447       High
cufflinks 2.841        
cufflinks 0.68        
cufflinks 0.038     Low Low
cufflinks 1.2        
cufflinks 0.795        
cufflinks 3.472       High
cufflinks 0.317       Low
cufflinks 1.515        
cufflinks 1.171        
cufflinks 1.489        
cufflinks 1.408        
cufflinks 0.598        
cufflinks 1.01        
cufflinks 1.241        

0 Strain