Gene : Glyma.13G236500 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  2365
Name:  ? Glyma.13G236500 Secondary Identifier:  ? PAC:30502850
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.13G236500 0.5kb upstream 0.5kb upstream 2310 true Chr13: 34675213-34677522 Glycine max
Glyma.13G236500 0.5kb upstream 0.5kb upstream 500 false Chr13: 34675213-34675712 Glycine max
Glyma.13G236500 0.5kb downstream 0.5kb downstream 2310 true Chr13: 34675713-34678022 Glycine max
Glyma.13G236500 0.5kb downstream 0.5kb downstream 500 false Chr13: 34677523-34678022 Glycine max
Glyma.13G236500 1.0kb upstream 1.0kb upstream 2810 true Chr13: 34674713-34677522 Glycine max
Glyma.13G236500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 34674713-34675712 Glycine max
Glyma.13G236500 1.0kb downstream 1.0kb downstream 2810 true Chr13: 34675713-34678522 Glycine max
Glyma.13G236500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 34677523-34678522 Glycine max
Glyma.13G236500 2.0kb upstream 2.0kb upstream 3810 true Chr13: 34673713-34677522 Glycine max
Glyma.13G236500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 34673713-34675712 Glycine max
Glyma.13G236500 2.0kb downstream 2.0kb downstream 3810 true Chr13: 34675713-34679522 Glycine max
Glyma.13G236500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 34677523-34679522 Glycine max
Glyma.13G236500 5.0kb upstream 5.0kb upstream 6810 true Chr13: 34670713-34677522 Glycine max
Glyma.13G236500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 34670713-34675712 Glycine max
Glyma.13G236500 5.0kb downstream 5.0kb downstream 6810 true Chr13: 34675713-34682522 Glycine max
Glyma.13G236500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 34677523-34682522 Glycine max
Glyma.13G236500 10.0kb upstream 10.0kb upstream 11810 true Chr13: 34665713-34677522 Glycine max
Glyma.13G236500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 34665713-34675712 Glycine max
Glyma.13G236500 10.0kb downstream 10.0kb downstream 11810 true Chr13: 34675713-34687522 Glycine max
Glyma.13G236500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 34677523-34687522 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312112 5265 Fabidae View MSA
124071408 5270 Rosid View MSA
123744061 5271 Pentapetalae View MSA
122791719 5272 Eudicot View MSA
122049614 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 63.7961 0.0 184.302 High High
cufflinks 2.85992 0.0 9.04949   Low
cufflinks 30.5831 0.0 82.3022 High  
cufflinks 5.40223 0.0 15.6624    
cufflinks 26.9874 0.0 72.57 High  
cufflinks 26.9516 0.0 72.3936 High  
cufflinks 2.26903 0.0 7.39308   Low
cufflinks 7.95835 0.0 22.1138    
cufflinks 22.1575 0.0 59.1915 High  
cufflinks 18.261     High  
cufflinks 109.166     High High
cufflinks 31.841     High  
cufflinks 22.905     High  
cufflinks 5.542       Low
cufflinks 108.729     High High
cufflinks 13.115     High  
cufflinks 153.633     High High
cufflinks 20.781     High  
cufflinks 3.783       Low
cufflinks 5.799       Low
cufflinks 75.735     High  
cufflinks 6.335        
cufflinks 7.051        
cufflinks 87.28     High High
cufflinks 4.827       Low
cufflinks 108.659     High High

0 Strain